| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0065 |
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| Symbol | tolR |
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| ID | 7137270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 66219 |
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| End bp | 66629 |
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| Gene Length | 411 bp |
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| Protein Length | 136 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643528482 |
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| Product | TolR protein |
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| Protein accession | YP_002424579 |
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| Protein GI | 218666354 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0848] Biopolymer transport protein |
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| TIGRFAM ID | [TIGR02801] TolR protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0122118 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGCGAC GGCGTCTCAT GGCGGAGATG AACGTCGTCC CCTACATCGA CGTGTCTCTC
GTGCTGCTGG TGATTTTCAT GCTCTCGGCG CCATTGCTGA CCCAGGGCGT CAACGTCAAT
CTGCCCAAGG GCGTGACCAA GCCGGTATCA GACAAAATCC CGCCGGTGCT GATTTCGGTG
ACGCGGCAGG GCGCCATCTC GGTGCAGTAC AAGGGGCACC ACAGCGCTGT CGCCCTGGAT
GACCTCGCGA CGGCGGTGGG GCATATCGCC GCCGCCAGCC ACGATCAGGT GCAGGTGCTG
GTGGGCGGTG ACGCCCATGT CGATTACGGC AAGGTCATGG CGGTCATGGC GCGTTTGCAG
GAGGCGGGCA TTTCCCATGT CGGTCTGCTG ACCCGCCCGG AGGGACATTG A
|
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| Protein sequence | MKRRRLMAEM NVVPYIDVSL VLLVIFMLSA PLLTQGVNVN LPKGVTKPVS DKIPPVLISV
TRQGAISVQY KGHHSAVALD DLATAVGHIA AASHDQVQVL VGGDAHVDYG KVMAVMARLQ
EAGISHVGLL TRPEGH
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