Gene AFE_0063 details

Gene Information

• Locus tag: AFE_0063
• Symbol: ybgC
• ID: 7137117
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 65092
• End bp: 65514
• Gene Length: 423 bp
• Protein Length: 140 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643528480
• Product: tol-pal system-associated acyl-CoA thioesterase
• Protein accession: YP_002424577
• Protein GI: 218665935
• COG category: [R] General function prediction only
• COG ID: [COG0824] Predicted thioesterase
• TIGRFAM ID: [TIGR00051] acyl-CoA thioester hydrolase, YbgC/YbaW family; [TIGR02799] tol-pal system-associated acyl-CoA thioesterase

Plasmid Coverage information

• Num covering plasmid clones: 7
• Plasmid unclonability p-value: 0.57846
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGTTG ATGCCTCCGT CAGCCGCTTC CAGATCCGCG TTTATTATGA AGATACGGAT 
CATGGCGGGG TGGTGTATCA TGCCAACTAT TTACGTTTCA TGGAGCGCGC ACGTACCGAG 
ATGCTGCGCG AACGGGGTTA TGAACTGGAT GTGCTGGAGC AGGATGCCGG GATCATTTTC 
GTGGTGCGCC GCGCCCGGCT GGATTTCCGC GCGCCGGCCC GCTTCAACGA CCTGCTCCTC 
GTGGAAACCC GGATCGTGAG CAAGAGCCCC GTGCGCATGG GCTTTCAGCA AATCGTTTCG 
GTGGGGGACA GAACGCTCTG TAGCGGAGAG GTGGAAGTGG TCTGCCTGGA TGCCGCCGGT 
TTTCGTCCCC ACGTCATCCC TGCAGCCTTG TTGCAGGCCA TCCCGCTTTC TGTTCAGCCG 
TGA 

 

Protein sequence

MPVDASVSRF QIRVYYEDTD HGGVVYHANY LRFMERARTE MLRERGYELD VLEQDAGIIF 
VVRRARLDFR APARFNDLLL VETRIVSKSP VRMGFQQIVS VGDRTLCSGE VEVVCLDAAG 
FRPHVIPAAL LQAIPLSVQP