Gene AFE_0061 details

Gene Information

• Locus tag: AFE_0061
• Symbol: ruvA
• ID: 7137210
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 63456
• End bp: 64037
• Gene Length: 582 bp
• Protein Length: 193 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643528478
• Product: Holliday junction DNA helicase RuvA
• Protein accession: YP_002424575
• Protein GI: 218665092
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0632] Holliday junction resolvasome, DNA-binding subunit
• TIGRFAM ID: [TIGR00084] Holliday junction DNA helicase, RuvA subunit

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCACCT CCCTTACCGG CACCATCCTG CAGCGGCGTC CGCCCTGGCT CTGGCTCGAT 
GTGCAGGGCG TCGGCTATGA ACTGGAGATG CCCCTGTCCG GTTTTTACCA GATGCCCGCC 
GAAGGCGCGG CGCTGACCGT CCACACCCAC CTCACGATCC GCGAAGACGC GCATCTGCTC 
TATGGTTTCA TGACCGTGGC GGAACGCGAC ATGTTTCGGC TGCTGATCCG GGTGAACGGC 
ATCGGCGGCA AGGTGGCGCT GGCGTGTCTG TCCGGTTTGC CCGCCGAGCG GCTCAGTCAG 
GCCGTGGCCG AGGGCAACAC GGCGCAGCTC ACCGCCATCC CTGGAATCGG CCCGAAAACC 
GCCGAGCGGC TGGTGGTGGA ACTGCGCGAC AAGATGGGCG GCATCGCGCC GGGGCCGATG 
GGGCGCGGCG GTGCCGGTGA TCCCCGTCAG GAAGCCATTG CAGCGCTGCT GACTTTAGGT 
TATAAGCCTG CGCAGGCGAG CCAGGCGATA GCCGGTCTGG CGGACGGACT GGGTCTGGAA 
GACCTCATCC GTCAGTCGCT GCAGAATTTG TCACGTCACT GA 

 

Protein sequence

MITSLTGTIL QRRPPWLWLD VQGVGYELEM PLSGFYQMPA EGAALTVHTH LTIREDAHLL 
YGFMTVAERD MFRLLIRVNG IGGKVALACL SGLPAERLSQ AVAEGNTAQL TAIPGIGPKT 
AERLVVELRD KMGGIAPGPM GRGGAGDPRQ EAIAALLTLG YKPAQASQAI AGLADGLGLE 
DLIRQSLQNL SRH