Gene AFE_0052 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0052 
Symbol 
ID7134069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp55329 
End bp55991 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content66% 
IMG OID643528469 
Producthypothetical protein 
Protein accessionYP_002424566 
Protein GI218667976 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.338571 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTACCT CCATAGGACC GGCCGGCGCC GACGCGGGCC TGAAGGCCGA CAGCACCCAG 
CGACCGGGCG GCGGACCCGC GCCCAGCGTC GCGGGGAATG CAGGAACGTC TGCGGCGGTA
CCGCCCGCCG TCGGCGCCGG CCAGGTGTCA CCGCTATCCG GCGGGTTATG CATTTTTCCG
GGATGCCCTG AAAACCCGCT GGCGGATTGG ACCCGCGCGC CACAGAAGCA ACGATTCCTC
GCCAGAAAAT CAGCGCCCCG GAAACCCGCT CACCGGCGGG CCAAACGTGC CCTCCGCATC
CGTCTGAGGC CGGGGCACAG AGCCGTCGCC CTCCTGCGTC ACCATCCCGG CAGGCCCCAT
CCCATAGCCG GTGTGAACCG CAACCCCTAT ATGTCCAGGC GGCCGCTGCA CCTGGCCTTT
CCGCGTTACG GCACCGGTGC CCTTGCCGTC CAGAGCGGCC TGGAACTTGC GCCCATTTCC
AGGTACCGGT ACTCCTGGCG GAACGGATCG TATCTGACAC TGGGTGTGCA TGGCCATTAC
GGCATCGTGC GGGGCTGGGA TATCTTGTCC GGCGTAGACT ATGTCAGCCA CACGAAAGCC
CTTTCGCCAC AGGAGGTGGA TGACTCTCGC GCGTATATCG GGGTGATGCA CAAGTTCCAG
TGA
 
Protein sequence
MFTSIGPAGA DAGLKADSTQ RPGGGPAPSV AGNAGTSAAV PPAVGAGQVS PLSGGLCIFP 
GCPENPLADW TRAPQKQRFL ARKSAPRKPA HRRAKRALRI RLRPGHRAVA LLRHHPGRPH
PIAGVNRNPY MSRRPLHLAF PRYGTGALAV QSGLELAPIS RYRYSWRNGS YLTLGVHGHY
GIVRGWDILS GVDYVSHTKA LSPQEVDDSR AYIGVMHKFQ