| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0032 |
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| Symbol | |
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| ID | 7134876 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 35984 |
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| End bp | 37570 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 643528449 |
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| Product | inner membrane protein, 60 kDa |
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| Protein accession | YP_002424546 |
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| Protein GI | 218665291 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATAATC AGAAGACCAT CCTCGCCGTT GCACTTGCCG TAGTCGTCTT TCTGCTGTTT
CAGGCCTGGC AGGAGCAGAA TGCGCCGAAA CCTGCAGCCG GACCTGCTGT CAGCCGGAGT
GTGACGGCGC CCGGCGCTAC GGCCACCTCG CCGGCGCCGG TGGATGTAGT GCCGGCTAGC
GCCGGCGGTC TCCCACCGGC GACCGGGGCC GCGGTATCTT TCCAGACGCA GGTGTTCACC
GGTCGGATCA GCCTGAACGG CGGAGATATT CAAAACCTGG GCCTGCGCCA CTACCCACAG
GCGGTGGACG ATACCGCCCC TTATCCTCTC CTCGACGGAG CACCGGCCAG GCTCACCATA
CAACAGAGCG GCTTCGTCAG CAGCGACGGG CAGACCCTGA CCGCCCGGTT TGCCGCCCCC
GCCGGCCAGA CGACCGCAGG CCAGCCCATC GTCCTCACCG GCAAGGCCGG CCCCCTGACC
GTAGAAAAAA CCTGGACATT CCAACCCGAC AGCTATGTGG CGGAAGAACA CGTCACCATC
ACCAATAGCG GGTCCGCGCC GTGGAACGGC AGCTATTTCG ATCAGATCCT GCGTAACGAC
CGCACCGAAA CGCACATGTT CATGTCGATT TTCACTGGCG CGGTGCTCAT GCACCAGGGC
AACTTCAGCG AGGTGAGTTT CAGCGATATC CACGACCATC CGGTACTGAA ATCCGGCCCC
GGCTGGGCGG GGATGATGGA CCATTACTTT CTCACCGCCA TCCTGCCCTC TGCTCATGCG
CAAGTTCAGG TTTATGCGCG TCCTTCGGGT ACCAATTATG TTGCCGGGGT GAGCACCCCG
CTGCCCACCC TGGCGCCGGG TCAGAGCACC ACCATCACCC AACAGCTCTT CCTTGGGCCG
AAGCGGCAAC AAACGCTGGC CGCCATGGGG CGCGGCCTGG AACAGACCGT GGACTACGGC
TGGTTCGCCA TCATCGCCGA GCCCATGCAT GTAGTCCTGA CCTGGTTCCA CGGGCTGGTC
GGCAACTGGG GGCTGGCGAT CATCCTGCTC GTCATAGTGG TCAAGTCCAT CTTCTTCTAC
CCCTCGGCCA TCAGCTACCG TTCCATGGCC AACATGCGGA AGCTCCAGCC CAAGCTGGAG
AAACTGAAGC AGGAAGTCGG CGACGATCGC CAGAAGCTGG GCGCGGCCAT GATGGAGTTG
TATCGCAGCG AGAAGGTCAA CCCCATGGCA GGCTGTCTGC CCATCATACT GCAGATGCCC
TTCTTTATCG CCCTGTACTG GGTACTGGTG GAGAGCGTCT CCCTGCGGCA GGCGCCCTTC
ATCCTCTGGA TTCATGATCT GGCCATACCC GACCCTTACT TCATCCTGCC CCTGCTCATG
GGCATATCCA TGTTCTTCCA GCAGCGCCTC AATCCCGCGC CGGTAGACCC CATGCAGAAG
CGCATCATGT CCGCGCTGCC GGTGGTCTTC GCCGTGTTCT TCTCCTTCTT CCCCGCAGGC
CTAGTGCTCT ACTGGCTGAC CAACAACGTG GTTTCCATCG GCCAGCAGTA CCTGATCACC
CGTCATATCA TGAAGGCCAA GGACTAG
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| Protein sequence | MDNQKTILAV ALAVVVFLLF QAWQEQNAPK PAAGPAVSRS VTAPGATATS PAPVDVVPAS
AGGLPPATGA AVSFQTQVFT GRISLNGGDI QNLGLRHYPQ AVDDTAPYPL LDGAPARLTI
QQSGFVSSDG QTLTARFAAP AGQTTAGQPI VLTGKAGPLT VEKTWTFQPD SYVAEEHVTI
TNSGSAPWNG SYFDQILRND RTETHMFMSI FTGAVLMHQG NFSEVSFSDI HDHPVLKSGP
GWAGMMDHYF LTAILPSAHA QVQVYARPSG TNYVAGVSTP LPTLAPGQST TITQQLFLGP
KRQQTLAAMG RGLEQTVDYG WFAIIAEPMH VVLTWFHGLV GNWGLAIILL VIVVKSIFFY
PSAISYRSMA NMRKLQPKLE KLKQEVGDDR QKLGAAMMEL YRSEKVNPMA GCLPIILQMP
FFIALYWVLV ESVSLRQAPF ILWIHDLAIP DPYFILPLLM GISMFFQQRL NPAPVDPMQK
RIMSALPVVF AVFFSFFPAG LVLYWLTNNV VSIGQQYLIT RHIMKAKD
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