Gene AFE_0030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0030 
Symbol 
ID7134036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp33338 
End bp34519 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content49% 
IMG OID643528447 
Producthypothetical protein 
Protein accessionYP_002424544 
Protein GI218665938 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGGCA CAGCGGCAGA AAATGGCCAG ACTCCGAGGT TTAACCTGGT GGCACCTCAA 
GACACATCCA GCAAGTCATT TAATATTCTC TTTGCGCATA TCATGCTGCG AGGAAATATC
AATAAGCATA TTTCATATAT GTTGGCCGGC GAGTTCGGGA ACAATCAGTT CACTCATGTT
GGCGGCAACT ATACACCACA GCTTATGGAC GCCCATGCTA CATTTAGTTA TGTCCCTGGC
GCCCGCTTTG AAGTAGGTAT CATCCGCGCA CCAGGTCCGG AAGAGGATAT GCAGGGATAC
CCGAACTTTG CGTTTGGGTT CAATTATAGT ACCGTCGTAC AACAACTGAT GTTGCAGCCG
TTTTATTCAA CAAATACCAA TTATGGGTCA GGGCCATACG AAAGTTATTC TGTTCCCGGT
AAAAACATAA TGGGAAACAA CGCATTCAGA TATCCTGGTG CGGAAGTAAT GGACTGGTTC
CGTGCGGGAA ATATGGAGTA CGCCTATGGC GTGATGGTCG GCAACTTTGG ACCTCTGGTG
GCGACCAACA CCTCGAGCGG AGCGCTCGTC GCAGCGCGCC TGCAGGCGTC TTACATTTTA
AAAGGGTTTG GGCCAATTCA TGGACCATTT CGCAGTGACG TGACGGGATT CCTCTGGTAT
CAGCATGCGA ACCCCATTTT TAATGGACAA TCCTACTCCA TGACACGGGA TGGACTTGGT
CTGACGTATA CGCAGGGATA TATGCACCGT TGGGGAAGAT GGCTCAAGTT TGAATATATC
CGTGGCTCCG GAATGATCGA TGCCCCCGCG GTGTTTAATG CCTACGCAGG AGCCGCACCC
ACGCTTACGG ACGCCCAGGT TTACCCTGGA AGCCAGAATA CGGCTAAAGG ATATTATGTT
TCCGGCGGAT TTTTTGTCAC CAACCGTTTA GAGTTCGATC TGCGCTATGA CTTCTATGAT
CGATTACCCA ATGTTGCGAC GCAGGAGAGA ATATTCAAAA CCTGGGCGAT CGGTGGCCAG
TACCATATTA CCAAGTCCAC CAGAATAATG GTTGATTATT TCGTTAGAAG TGTGAAAATA
CCTGATCTGT CCGGTATTCC GCCAGCACAA AGAGTATTAC CACAAAGTGT TGCGGATGCC
GCTGACAACG AGTTTGCGGT TACCGCGTTT ATTGCATTCT GA
 
Protein sequence
MNGTAAENGQ TPRFNLVAPQ DTSSKSFNIL FAHIMLRGNI NKHISYMLAG EFGNNQFTHV 
GGNYTPQLMD AHATFSYVPG ARFEVGIIRA PGPEEDMQGY PNFAFGFNYS TVVQQLMLQP
FYSTNTNYGS GPYESYSVPG KNIMGNNAFR YPGAEVMDWF RAGNMEYAYG VMVGNFGPLV
ATNTSSGALV AARLQASYIL KGFGPIHGPF RSDVTGFLWY QHANPIFNGQ SYSMTRDGLG
LTYTQGYMHR WGRWLKFEYI RGSGMIDAPA VFNAYAGAAP TLTDAQVYPG SQNTAKGYYV
SGGFFVTNRL EFDLRYDFYD RLPNVATQER IFKTWAIGGQ YHITKSTRIM VDYFVRSVKI
PDLSGIPPAQ RVLPQSVADA ADNEFAVTAF IAF