| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0027 |
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| Symbol | |
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| ID | 7134561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 29755 |
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| End bp | 31122 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643528444 |
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| Product | sigma-54 dependent transcriptional regulator/response regulator |
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| Protein accession | YP_002424541 |
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| Protein GI | 218666460 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGATCCC AGAAAATCCT CATCGTCGAG GACGAAAAAA ATCTGCGTAG CGTACTCGCA
GCCACCCTGG AGGCTGAAGG CTTCTCGACT GCACAAACAG AAAGTGCGGA GGACGCCCTG
GCCATCATGG CCAGGGAACT CCCCGTCCTG GTCCTTACAG ACCAGCGCCT GCCAGGGATG
AGCGGTACCG AACTGCTGGC ACGCATCAAG GAGCGCTGGC CCAGAACACC TGTGCTGATT
GCCACGGCCT ACGGTGAAAT CGAACAGGCT GTGCAAGCTA TCAAGGCCGG GGCGGAGCAT
TACCTGACCA AGCCGGTGGA TGAAGGGGAG CTCGTCGCCA TCATTCGCCA GGCGTTGAGT
TGCCGGGGTC ACACCAACCC GCCACGCAGC CAGGACTTGC CGCGCCACGG CATTATCGGG
GAGAGTCCAG GCACACTCGA AATTCTGGAG ATGATAAATC TCGTCGCGCC CGCCCCTTCC
AATGTTCTTA TTACCGGAGA GTCAGGAACC GGCAAAGAGA TGGTTGCCAG GGGGTTGCAT
GTGGCGTCCC CCCGTGCCCA TGCGCCTTTT CTTGCATTCA ACTGTGGTGC CATTCCCCTG
GATCTGGTGG AAAGCGAAAT TTTTGGTCAC GAGAAAGGCG CCTTCACCGG TGCGGTGCGG
TCTCAGGCAG GGAAATTGGA AATGGCGGGC TCCGGAACCC TCTTTCTGGA CGAAGTGGGT
GACATGCCCC TGGCTATGCA GGTCAAGTTG TTACGCACCT TGCAGGAGCG GGAATATACC
CGCCTCGGCG GGAACCAACC CCTGCGTCTC GCGGCTCGTA TCATCGCTGC AACCCATGTG
GACCTCGCCA AGGCGGTGGA GGCAGGCAGT TTTCGGGAAG ACCTGTATTA TCGGTTGAAT
GTCATCCCGT TGCACATCCC GCCGCTGCGG GAGCGGCGGG AGGATGTCGC GCCCCTCGTC
CATCATTTTT TGCGGCGTGT GTGCACAGAG TTGGGGCGGC CTGAAGTAGA CATAGCGACT
GCGGCGTTAG CTGCCATGGA GGCCTATTCG TGGCCCGGCA ACATTCGCCA GCTCGAGAAT
ATCGTCGAGC GTTTGGTGGT GCTGAATCGG GGGGGCACCA TACTTGCCGC CGATCTCCCG
AACGAGATGC GTACCACGGA AACAGAGAGA ATACGCCCCT TTGGGGGGGC TTATGATCTC
CACGCCGTAG AGCGCGAGGC AGTCGTGTCG GCCCTGAACA AGGCGCAATC CAACAAGAGT
CAGGCCGCAC TGTTGCTTGG TATCAGCCGT AAGCAACTGC ACACCCGCAT GAAAAATCTC
GGACTGATCG TCGACCGTGA AGATGTGCCG GGCGGCGAGA AGCTATAA
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| Protein sequence | MRSQKILIVE DEKNLRSVLA ATLEAEGFST AQTESAEDAL AIMARELPVL VLTDQRLPGM
SGTELLARIK ERWPRTPVLI ATAYGEIEQA VQAIKAGAEH YLTKPVDEGE LVAIIRQALS
CRGHTNPPRS QDLPRHGIIG ESPGTLEILE MINLVAPAPS NVLITGESGT GKEMVARGLH
VASPRAHAPF LAFNCGAIPL DLVESEIFGH EKGAFTGAVR SQAGKLEMAG SGTLFLDEVG
DMPLAMQVKL LRTLQEREYT RLGGNQPLRL AARIIAATHV DLAKAVEAGS FREDLYYRLN
VIPLHIPPLR ERREDVAPLV HHFLRRVCTE LGRPEVDIAT AALAAMEAYS WPGNIRQLEN
IVERLVVLNR GGTILAADLP NEMRTTETER IRPFGGAYDL HAVEREAVVS ALNKAQSNKS
QAALLLGISR KQLHTRMKNL GLIVDREDVP GGEKL
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