| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0003 |
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| Symbol | gyrB |
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| ID | 7136631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2237 |
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| End bp | 4639 |
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| Gene Length | 2403 bp |
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| Protein Length | 800 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643528421 |
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| Product | DNA gyrase, B subunit |
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| Protein accession | YP_002424518 |
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| Protein GI | 218665824 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGGAAA CATACGATTC TTCCAGTATC CAGGTGTTGA AAGGTCTGGA AGCGGTACGC
AAACGCCCCG GCATGTATAT CGGCGATACC GATGACGGCA GCGGACTGCA TCACATGGTC
TTCGAAGTAG TGGATAACGC CATCGATGAG GCGCTCGGCG GGTATTGCGA TACCATCATC
GTGACCATCC ACGAGGATGA ATCCGTCAGC ATCAGCGACA ACGGTCGTGG TATACCGGTG
GACATGCACG CCGGGGAGGG CCGATCCGCT GCCGAAGTCA TCATGACCGT GCTGCATGCA
GGTGGTAAGT TCGATGACAA CGCCTACAAG GTTTCCGGCG GCTTGCACGG GGTTGGTGTC
TCGGTGGTCA ACGCCCTTTC GGAAACTCTG CAATTGCGCA TCTTCCGTGA CGGTTATGTC
TGGACCCAGG AGTATCACGA TGGCGAACCC CAGGCACCCA TCGCCCGCGG CGATGCATCA
CGCAAACATG GCAGTACCAT CCGCTTCAAA CCCTCGCCCC AGGTTTTTGC CGATACCCAT
TTTCACTTCG AGATCATCGC GAAGCGCTTG CGCGAACTGG CCTTTCTCAA TTCCGGCGTG
CATATCACCC TGCTGGATGA GCGGGCCAGC CGGGAGGAAA CCTTTCATTA TGAAGGCGGT
ATTCGCGCTT TCGTAGAGCA TCTCAACCGC AGCAAAACCG CCATTCATCC CAGTGTGATC
ACTCTCACCG GCGAGCGCGA CGGCATTGTC GTCGAAGCGG CCCTGCAGTG GAACGAAGGC
TATAACGAGG CGGTGCTCTG CTTCACCAAC AATATTCCCC AGGCCGATGG CGGCACCCAT
TTGGCGGGCT TTCGCGGTGC CCTGACCCGT ACCTTGAACC AGTATATGGA ACGGGAAGGC
ATCATCGCCA AGGCCAAGGT TGCGGTGAGT GGCGAGGATG CACGCGAAGG ATTGACAGCG
GTGCTTTCCG TCAAGGTACC GGACCCCAAA TTTTCTTCGC AGACCAAGGA AAAACTGGTC
TCCAGCGAGG TCAAACCGAT AGTCGAGTCC TCCATGTCCG AGGCGCTGAC CATGTTTCTG
GATGAGCATC CCAAAGAGGC GCAGGCCATC GCCGCCAAGA TCGTCGAAGC GGCGCGGGCG
CGGGAAGCCG CCCGGCGGGC ACGGGAACTG ACCCGCCGCA AGGGGGCGCT GGACATTGCC
AACCTTCCCG GCAAGCTGGC CGACTGTCAG GAGAAAGATC CGGCCCAGTG TGAAATCTAT
CTGGTGGAGG GCGATTCCGC AGGCGGCTCT GCCAAACAGG GCCGGGATCG CCGGCATCAG
GCCATCCTTC CCCTGAAGGG CAAAATCCTC AATGTGGAAC GGGCGCGTTT CGACCGGATG
CTTTCGTCCG ACGAAATTGG CACCCTGATT ACCGCGCTGG GTACCGGTAT CGGTGCCGGG
GATTTTGATG TGGCTAAGCT GCGTTATCAC CGGGTCATCA TCATGACGGA CGCGGACGTG
GACGGCAGCC ACATCCGCAC CCTGTTGCTG ACCTTTTTCT ATCGGCAGAT GCCCGATCTC
GTGGCACGCG GCCATATTTA CATCGCCCAG CCGCCCCTCT ACAAGGTCAA GAAGGGCAAG
GAGGAACGCT ACCTCAAGGA TGACGGCGAA CTGGCCGCCT ATCTGCGTGA AATTGCCATG
CAGGGCGCGC AATTCCGTCC CGCGGCGGAT GCCGAGCCGG TAACGGATGA GCAACTGGGC
GGCATGATGC GTCAATACCA GAACATCGAG GCACTGGTGC AGCGTCTGGA ACGGCGTTAT
CCCAGTACTC TGCTCTGGGC CTTGGCCACC TTGCCACCCA TCGTTGCGGA GTCGGCGGAT
AGCGCCACCT GGGACGATTT TGCGCGGCAG CTCCGCGCGG CACTGGAAGT GAATGCCCTG
CCCGCCGAAC ATTACACGGT GGAGCGGGTG GGTGAAGCGG AGGCCTTGCG CCTGGTGGTG
CGCCGCGAAC ATCATGGCAG CGTGGAACTG CGTTTCTTCG ATCAGGATTT TTTTGCCGGG
GGCGAATATC GACATCTGGC GGATTATGCG CGGCAGATCG AGGGCAAAAT CGGCGTGGGA
GCGCGTATGG AAAGGGGCGA ACGAGGGCTT GCCGTCAGCC GTTTCCGCAC CGCCATGGAC
TGGCTTCTGG CGGATGCCCG CCGTGGCGTC GAGATTCAGC GCTACAAGGG ACTCGGTGAA
ATGAATCCGG AACAGCTCTG GGAAACCACC ATGAATGCCG CAAACCGCCG TCTGGTGCGG
GTGGATGTGG AAGACGCCAT CGCCGCCGAC GAGGTCTTTT CCATGCTCAT GGGCGACGCG
GTGGAACCGC GTCGGCGCTT TATCGAGGAG AATGCGCGTT TTGTATCCAG ACTCGATATC
TGA
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| Protein sequence | MMETYDSSSI QVLKGLEAVR KRPGMYIGDT DDGSGLHHMV FEVVDNAIDE ALGGYCDTII
VTIHEDESVS ISDNGRGIPV DMHAGEGRSA AEVIMTVLHA GGKFDDNAYK VSGGLHGVGV
SVVNALSETL QLRIFRDGYV WTQEYHDGEP QAPIARGDAS RKHGSTIRFK PSPQVFADTH
FHFEIIAKRL RELAFLNSGV HITLLDERAS REETFHYEGG IRAFVEHLNR SKTAIHPSVI
TLTGERDGIV VEAALQWNEG YNEAVLCFTN NIPQADGGTH LAGFRGALTR TLNQYMEREG
IIAKAKVAVS GEDAREGLTA VLSVKVPDPK FSSQTKEKLV SSEVKPIVES SMSEALTMFL
DEHPKEAQAI AAKIVEAARA REAARRAREL TRRKGALDIA NLPGKLADCQ EKDPAQCEIY
LVEGDSAGGS AKQGRDRRHQ AILPLKGKIL NVERARFDRM LSSDEIGTLI TALGTGIGAG
DFDVAKLRYH RVIIMTDADV DGSHIRTLLL TFFYRQMPDL VARGHIYIAQ PPLYKVKKGK
EERYLKDDGE LAAYLREIAM QGAQFRPAAD AEPVTDEQLG GMMRQYQNIE ALVQRLERRY
PSTLLWALAT LPPIVAESAD SATWDDFARQ LRAALEVNAL PAEHYTVERV GEAEALRLVV
RREHHGSVEL RFFDQDFFAG GEYRHLADYA RQIEGKIGVG ARMERGERGL AVSRFRTAMD
WLLADARRGV EIQRYKGLGE MNPEQLWETT MNAANRRLVR VDVEDAIAAD EVFSMLMGDA
VEPRRRFIEE NARFVSRLDI
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