Gene Mchl_5735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5735 
Symbol 
ID7119084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011758 
Strand
Start bp379094 
End bp379606 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content71% 
IMG OID643528380 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_002424376 
Protein GI218533561 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.61786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGACGATC TCGCCACCTT GATCGAGCCG CAGATCCTGG CGCTGCGGCG CTACGCCGTC 
GCGCTTCTGC GCGAGCGCGA GGCTGCCGAC GACCTCGTTC AGGACACCCT GGAGCGAGCG
ATCCGCGGCT GGCCGCAGCG CCGTCGCGAC GGCGACCTGC GCGCATGGCT GTTCGCGATC
TTGCGCAACC GCTACCTCGA AGGCGTGCGC CGCCGACGGT GCGTCGAGGT CGGTCCGGAG
GCGCTGGCCG AGGTCGCGGA CGCGGCAACA GATCCCGAAA CCGCTCTCGG CATGCGGGAC
GTTCTCGACG GGCTCGCTGG CCTGCCCGAG GACCAGCGCT CGGTGCTGCT TCTCGTCGCG
GTGGAGGACA TGTCCTATGC CGAGGCCGCC GCCGTGCTCG CCGTGCCGGT CGGCACGGTG
ATGTCGCGCC TGAGCCGGGC ACGGGGCCGA ATGCGCGCTT TCCTGGACCT CGCCCCGACA
GTCGTCACAG GCCATCTGCG GAGGGTGAAA TGA
 
Protein sequence
MDDLATLIEP QILALRRYAV ALLREREAAD DLVQDTLERA IRGWPQRRRD GDLRAWLFAI 
LRNRYLEGVR RRRCVEVGPE ALAEVADAAT DPETALGMRD VLDGLAGLPE DQRSVLLLVA
VEDMSYAEAA AVLAVPVGTV MSRLSRARGR MRAFLDLAPT VVTGHLRRVK