| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_5496 |
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| Symbol | |
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| ID | 7119278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011758 |
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| Strand | + |
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| Start bp | 121255 |
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| End bp | 124416 |
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| Gene Length | 3162 bp |
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| Protein Length | 1053 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643528169 |
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| Product | transporter, hydrophobe/amphiphile efflux-1 (HAE1) family |
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| Protein accession | YP_002424165 |
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| Protein GI | 218533350 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.7814 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.546189 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCT TCTTTATCGA GCGCCCGATC TTCGCCTGGG CGGTCTCCAT CTTCATCATG
CTGGTCGGCG CGATCTCCAT CGCGTTCCTG CCGGTCTCGC AGTACCCGGA CGTGGCCCCC
GTCACGATCC AGGTGACGGC GACCTACCCG GGCGCACCGC CGGAACGGCT CTACGACGGC
GTCACCCGCA TCATCGAGGA GGAGCTCAAC GGCATCCCCG GGTTGATGTA CTTCGAGAGC
ACCAGCGACA CCTCGGGCCA AGCCCAGATC ATGGCCTCGT TCGCTCCGGG CTCGGACCCG
TCGAAGTCGA CCGTCGCGGT CCAGAACCGC ATCAAGCGCA TCGAGGCGCG CCTGCCCCGC
GCCGTGACCC AGCAGGGCGT CATCGTCGAG GAGGCCAGCA CCAGCTTCCT CCAGTTCGTC
ATCGTCTCCT CCAAGGACGG AGCCTTGAGC GAGACGGACC TCGGCGACCT CGCCGCCCGA
CGCATCCTGG GCGAGCTCAG GCGGGTGTCG GGTGTCGGCC GGGCGACCCT GTTCTCGTCC
GAGAAGGCGC TGCGCATCTG GATCGATCCG GTCAAGCTCG TCGGGTTCAG TATGACGCCG
GGCGACGTCA CGGCGGCGGT CGGCGCGCAG AACGCGCAGG TGGCCTCGGG CATCGTCGGC
GCCCAGCCGG CCAAGGAAGG CCAGCGCATC GCCGCCAACG TCCTGGTGAA GGGCCAGCTG
TCCACGGTCG CGGAGTTCGA GGAGATCGTG CTGCGGGCCA ACCCCGACGG TTCGCTGGTG
CGCCTGCGCG ACGTGGCCGA GGTCGAGCTC GGCGGGCAGT CCTACACGAT GCAGACCCGC
CTCGACGGGC GCCCCGCCGC CGGCATCGGC ATCCAGCTCG CGCCCGGCGG CAACGCCCTC
GCGGCCGCAA CCGGCGTGAA GGCCAAGATC GCCCAACTCC AGCGCACGTT GCCAGCCAAC
GTGAGCGTGA CGGTGCCCTA CGACACCACG CCCTTCGTCG AGGTCTCGAT CAAGAAGGTG
CTGATGACGC TCGCCGAGGC GATGGCGCTC GTCTTCGCGG TCATGTTCCT GTTCCTACAG
AACTTCCGTT ACACCATCAT CCCGACCATC GTGGTGCCGG TGGCCCTGCT CGGGACCTGC
GGCGCGCTGT TGGTCGCCGG CTTCTCGATC AACGTGCTGA CGATGTTCGG CATGGTGCTG
GCCATCGGCA TTCTCGTCGA CGACGCCATC GTCGTGGTCG AGAACGTCGA GCGCATCATG
GCCGAGGAGG GGCTGCCGCC GCGGGAGGCC ACCGCCAAGG CCATGGGCCA GATCACGGGG
GCCATCGTCG GCATCACCTC GGTCCTGGTG GCGGTGTTCG TGCCGCTCGC CTTCTTCCCA
GGCTCGGTCG GCGTGATCTA CCGCCAGTTC GCGGTGAGCA TGGCGACCTC CATCGCCTTC
TCCGCCTTCC TGGCGCTCTC GCTCACCCCG GCGCTCTGCG CCACGCTGCT CAAGCCCGTC
GAGGCCAGCC ACGGCCACGC CAAGGGCGGT TTCTTCGGCT GGTTCAACCG CCGGTTCCAG
GCCGGCACGC TGGCCTACCG CACGGGCGTC GCCGGGATGC TGCGCCGGCC GGTGCGCTCG
CTCCTCGTCT ACGCGGCGCT CGTCGCGGCG CTGGGCTGGG GCTACCTGCG CATGCCGTCG
AGCTTCCTGC CCATCGAGGA CCAGGGCTAC GTCATCGTCG ACGCGCAGAC CCCGCCGGAA
TCCTCCACCG GCCGCACCCT CGACGTGGCC AAGCGGATCG AGGAGCATTT CGGCGCCGAG
CCGTCGGTGG TGGCCCGGGT CGTGCTCCTC GGCTACGGCT TCTCGGGCCA GGGACAGAAC
GCGTCCATCG CCTTCGTCAC CCTGAAGGAC TGGAAGGAAC GTGGGCCGGA CGACGGCGCG
GAGGCGCTCA GCGCCCGGGC CAACGCCGTG CTCGGCGGCC TGCCGGACGC CATCGCCATG
GCGCTGTCGC CGCCCGCCAT CGAAGCGCTC GGCAACTCCA GCGGCTTCGC CTTCCGCCTC
CAGGACAAGG CGCAGCAAGG CTACGCGGCG CTGGCCGCCG CCCGCGACCA GTTGCTCAAA
GCGGCGAGCC AGAGCCCGAT CCTGCAGGGC GTCTACGTCG AAGGCCTGCC GACCGCGCCG
CAGATCGAGC TCACCCTCGA CCGGCAGAAG GCAAACGCGC TCGGTGTGAC CTTCGCCGAC
ATCAACGACA CGCTCTCCAC GAGCCTCGGC TCGGCCTACG TCAACGACTT CCCGAACCAG
GCGCGCATGC AGCGGGTGAT CGTCCAGGCG GAGGCGTCCC GGCGGATGAG GGCCGAGGAC
CTGCTCGACC TGCACGTCCG CAACGCCAAG GGACAGATGG TGCCGCTGCA GTCCTTCGCG
CGTGTCGCCT GGACGATGGG GCCGGCCCAG GTCGTCGGCT TTAACGGCTA CCCGAGCATC
AAGATCACCG GCAGCGCGGC CCCGGGCTTC GCCAGCGGCG ACGCCATGGC CGAGATGGAA
CGGCTCGCTG GGCAACTGCC CGCGGGCTTC GACTTCGCCT GGACCGGGCA GTCGCTGCAG
GAGAAGCTCT CCGGCTCGCA GGCCGTCTAC CTGCTCGCGC TGGCGCTGTT CTGCGTCTTC
CTCTGCCTGG CCGCGCTCTA CGAGAGCTGG TCGATCCCGC TCGCCGTGCT GCTCGTGGTA
CCCACCGGCG TGGTCGGCGC CGTGTTCGCG ATGCTCGCGC GCGACATGCC GAACGACGTC
TACTTCAAGG TCGGCCTGAT CACGGTGATC GGCCTGACGG CGAAGAACGC GATCCTCATC
ATCGAGGTGG CCAAGGAGCT CGTGGCGCAG GGCCGGCCAG TGCACGAGGC GGCGCTGGAG
GCGTGCGAAC TGCGCTTCCG GCCCATCGTG ATGACCTCGT TCGCCTTCAT CCTCGGCGTG
GTGCCGCTCG CCATCGCCAC GGGCGCCAGC ATGAACAGCC AGCGGGCCAT CGGCACCGGC
GTGTTCGGCG GCATGGTCAC CGCGACGGTG CTCGCGGTGT TCGCCACCCC GCTCTTCTAC
GTGCTGATCG CCCGGGCCTT CCGGTCGCGG AAGGCCCGCG GGACGAAGGA GGGGGCGGCC
CACGCCGGTG CCTCCGCCAC CCACGGCATG CCCGCGAGCT GA
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| Protein sequence | MTRFFIERPI FAWAVSIFIM LVGAISIAFL PVSQYPDVAP VTIQVTATYP GAPPERLYDG
VTRIIEEELN GIPGLMYFES TSDTSGQAQI MASFAPGSDP SKSTVAVQNR IKRIEARLPR
AVTQQGVIVE EASTSFLQFV IVSSKDGALS ETDLGDLAAR RILGELRRVS GVGRATLFSS
EKALRIWIDP VKLVGFSMTP GDVTAAVGAQ NAQVASGIVG AQPAKEGQRI AANVLVKGQL
STVAEFEEIV LRANPDGSLV RLRDVAEVEL GGQSYTMQTR LDGRPAAGIG IQLAPGGNAL
AAATGVKAKI AQLQRTLPAN VSVTVPYDTT PFVEVSIKKV LMTLAEAMAL VFAVMFLFLQ
NFRYTIIPTI VVPVALLGTC GALLVAGFSI NVLTMFGMVL AIGILVDDAI VVVENVERIM
AEEGLPPREA TAKAMGQITG AIVGITSVLV AVFVPLAFFP GSVGVIYRQF AVSMATSIAF
SAFLALSLTP ALCATLLKPV EASHGHAKGG FFGWFNRRFQ AGTLAYRTGV AGMLRRPVRS
LLVYAALVAA LGWGYLRMPS SFLPIEDQGY VIVDAQTPPE SSTGRTLDVA KRIEEHFGAE
PSVVARVVLL GYGFSGQGQN ASIAFVTLKD WKERGPDDGA EALSARANAV LGGLPDAIAM
ALSPPAIEAL GNSSGFAFRL QDKAQQGYAA LAAARDQLLK AASQSPILQG VYVEGLPTAP
QIELTLDRQK ANALGVTFAD INDTLSTSLG SAYVNDFPNQ ARMQRVIVQA EASRRMRAED
LLDLHVRNAK GQMVPLQSFA RVAWTMGPAQ VVGFNGYPSI KITGSAAPGF ASGDAMAEME
RLAGQLPAGF DFAWTGQSLQ EKLSGSQAVY LLALALFCVF LCLAALYESW SIPLAVLLVV
PTGVVGAVFA MLARDMPNDV YFKVGLITVI GLTAKNAILI IEVAKELVAQ GRPVHEAALE
ACELRFRPIV MTSFAFILGV VPLAIATGAS MNSQRAIGTG VFGGMVTATV LAVFATPLFY
VLIARAFRSR KARGTKEGAA HAGASATHGM PAS
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