Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_5412 |
Symbol | |
ID | 7119195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011758 |
Strand | - |
Start bp | 29628 |
End bp | 32981 |
Gene Length | 3354 bp |
Protein Length | 1117 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643528101 |
Product | UvrD/REP helicase |
Protein accession | YP_002424097 |
Protein GI | 218533282 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGCCC ACGATCGGGG ACTCGCCGAC GCGGCCCAGC GCGCCCTCGC CATCAACGCC CACGACCGCT CGCTGCTCGT GGAGGCTGGG GCCGGATCGG GAAAGACTGC CCTGATGGCC GGGCGGGTCG CAATGATGCT GGCGTCAGGA ACCGCCCCTG GATCAATCGC CGCCGTCACC TTCACGGAAC TTGCCGCCAG CGAGTTGCTG GAGCGCGTCG GCGAGGTGAC GGGACGGCTG ATCGAGGGCC AGGTGCCGGA GGAAATGCGG ATCGCCCTCC CGAACGGCCT GTCCGTCAGC CAGCGACAGT TGCTGGTCGA GGCCGCCGAG CATCTCGACG AGATGGCCTG CACCACGATC CACGGGTTCT GCCAGCGCTT GGTCAAGCCA TATCCGGTCG AGGCTGACAT CGACCCCGGT GCCCGGGTTG TCGATGAGGC GGAAGCCGAC GGGATTTTCC AGGACCTGCG CGATGGGTGG CTTCGCGAGT GCCTCTCCGG GGGCGGCGGG CTTGTCGCGG AGATGGTGCT CGCCGATCCG GACGCGGCGC TCGCGGCCAT CGACCGTGTC GCTGGATGCC TGCGTGAAGG CCGCACGGTC GGAACCGCGC CGGCAGAGCC CCTTCCCGGC TTGGTGCGGG CGTTTGGGGC CAGCGTGCGG AAGTTCGGGG ACTTCCAGCG GACGAGTGGG GTGTCCGAGG CCGAGACGGT CGCGGGCGTG ACGGCGTTCG AGGTGATGGC TGCCCGGCTA CCGGACGCCG GTGCCGTCGA CGACTCCGAG CTCATCGCCA TCCTGACGGC ACCGGCCGAG GCGAACTTGT GCAAGGCGGA CGGCGACTTC GCGAAGTACC GCGGCGGCAA GAAGAAGTGG GCCGATGCCG CCAAGATGGT CGGTCTGCCG AAGGCAGAGG CCGAACGGCT CCAGGCGTGC GCCGAGCGGC TGCATGTCGA ATGCTGCGAG ACCTGGGCTC GTCTGAAGGC CAATGCGGCA AGCGAGCTCC TGGCTAGGCT CGTCGGAGCG GTGGGGGCCG TTCTCGAGCG GTATCAAGCC CGCAAGCGCG CCGGCGCCCT CCTCGACTTC GACGACCTGA TCGCGGCGGC CGCCAAGTTG CTTCGGGAGC ACGAGATCGT TCGACAGGCG TTGGGACGTC GCTACCGGCA CGTCTTGGTC GACGAGTTCC AGGACACCGA CCCGTTGCAG ACCGAGATCC TCTGGCGCCT GTGCGGCGAG CTGCCCGCTG GGGCAACCGA TGTATGGGCA CAACGCGTGC TCCGACCGGG CGCGCTGTTC CTTGTCGGCG ACCCGAAACA GGCCATCTAT CGTTTCCGCG GCGCGGACGT CTCGACTTAC GTCCGCGCGC GCAACTGCAT CCTCGCGCAG TCGCCGGGCG ATGTCCTGTC GATCTCGACG AACTTTCGCT CCTGCCGCTC AATTCTCGCG TATGTCGACC AACGCTTCAG GAACATCCTG AGCGGGGTCG GCCAGCCCGG GTTTACGGCC CTCGACGCCT ACCACCCCGA CCATGGCCGC GGGCCCTGCA TCGCGGCCTT GGACGTGCCC GCGGGCGCCG ATGGCGCGAA GCAGGACGCG CAGGCGCTTC GCGATGTCGA GGCTGAAGCG GTCGCGGACC TCTGCGCGCG CCTGATCGGC CAGCAGCTCG TCACCTGTAA GCGCGACGGG ACACGCACGC TCCGCGCCGG CGACATCGCG CTGCTGGCGC CGAGCGGTAG CGACCTGTGG CGCTACGAGG AAGCCCTCGA ATCCAGGGGC ATCCCCGTGT CCACCCAGGC CGGAAAGGGC TTCTTCCGGC GACAGGAGAT CCACGACCTG ATCGCGCTGG CACGGGTTCT CGCCGACCCG CGCGACACGC TGGCACTCGG GGCCCTACTA CGCGGGCCGG CCATTGGGCT GACGGACGAG GAGCTGCTCG ATCTTGTCGA CGGCCTGCCC CGCGATCCAG AGCACCCGGA GAGCATCCCC AAGCTGCGGC TGCAGGTTGA CGTCGCGCAC ATTAGCCATC CGGTTGCTCG GCCGGTATTC GAACGACTGC AGGTCCTGGC GAAGCGAGCG CTCGGCACGA CGCCACACGA CATCCTGAGC CAGGCAGTCG ATGCGCTCAT GCTGCGCCCG GTGGTCCGGC ATCGATACGA CGGCCACGCC GAGCGGGCGC TCGCGAATAT TGACCTGTTC CTGGAGATGT CGCGGCCCTA CTCCGTCCGC GGCCTGCGGG CCTTCGCGGG TGTGATGAAG GCGTCATGGG AAGGACGGAC GCGCGCCGTC GAGGGACGGC CCGACTCACA GGAGGCCGCG GTTTCCCTCT TCACCATGCA CGCGTCCAAG GGGCTCGAAT GGCCCGTCGT GATCCCCATC AACACCTCCA CCAGGACCAA AGCGGTAACC GGCGCGCTGA TCGACCGCAC GTCGAACTGC CTCTACTGCC CCGTGTTCGG GGTCCGGCCC GTCGGCTACG GGGAAGCGCT TGAGAACGAG AAGCGCGAGG TCGGGAACGA GCGGGTCCGC CTATGGTACG TGGCCGCTAC CCGAGCGCGC GAGACATTGG TGCTGCCGAG GTTTGTCGAG CCGGGGGGCA GTACGTCCTG GTCGTCGGTG GTCGACCTAG GCTTGGACGA CCTTCCCGCC ATCGACATCG ACCGGCTGCC GACGGCGCCT CCGCCTGCCT CGACCGAGCC CGCGAACGCG CAGACCCGTG AGGTGTTTGC CGCCGAGGCG GACGCGGTCG CCCGGCGACG CCGCTTGAGC TGGGTCGTTC CCAGCCGGGG CGAAGACGCC GGCACGATCG CTTGCTGTCC CTCCGACATG GTTGAGGAAG AAGTCGATGT TCCTCCTACA GCCGCGGCCA TCCCGCAGGG CGGCCGGGAG CGAGGCATTC TCATCCACAA GCTGCTGGAA GAGATCCTGA CGGGCGAGAC TGGGGAGGTG GACCTCGAAG GACGGGCCGG CGTTCTCGCC CGGCAGCTCG GCCTCCGGAC GAAGGCCACG CCCGACTTCG CGTTGGATCT CGGGGAGGTT GCGGCCAGCG TGTTAAGGGC GTTGAGCGTT CCCGAGATCG CCGGTATGCG CGAGCGCCTC CAGCCCGAGC TGCCGGTGTT TGGGTTCGAG AGCTTGGCCG ACGAGGACCA TGCGACCGCT GGCGTGGCGG ATGCCATTAT CCTCGACGGG CTTGGCCGGC CGGACGTCGT CGTTGATTGG AAGAGTGACG TCGATCCTTC GGAAGCTGTC ATCGCAGACT ACCGCTGTCA GGTGTTGAGA TATCTTCTGG CTACGGAAGC GCGCCTCGGT TTACTTGTCT TCGCGACGAG CGGCCGTGTG GTGAAGGTGA CGTTACCGCC CTAA
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Protein sequence | MTAHDRGLAD AAQRALAINA HDRSLLVEAG AGSGKTALMA GRVAMMLASG TAPGSIAAVT FTELAASELL ERVGEVTGRL IEGQVPEEMR IALPNGLSVS QRQLLVEAAE HLDEMACTTI HGFCQRLVKP YPVEADIDPG ARVVDEAEAD GIFQDLRDGW LRECLSGGGG LVAEMVLADP DAALAAIDRV AGCLREGRTV GTAPAEPLPG LVRAFGASVR KFGDFQRTSG VSEAETVAGV TAFEVMAARL PDAGAVDDSE LIAILTAPAE ANLCKADGDF AKYRGGKKKW ADAAKMVGLP KAEAERLQAC AERLHVECCE TWARLKANAA SELLARLVGA VGAVLERYQA RKRAGALLDF DDLIAAAAKL LREHEIVRQA LGRRYRHVLV DEFQDTDPLQ TEILWRLCGE LPAGATDVWA QRVLRPGALF LVGDPKQAIY RFRGADVSTY VRARNCILAQ SPGDVLSIST NFRSCRSILA YVDQRFRNIL SGVGQPGFTA LDAYHPDHGR GPCIAALDVP AGADGAKQDA QALRDVEAEA VADLCARLIG QQLVTCKRDG TRTLRAGDIA LLAPSGSDLW RYEEALESRG IPVSTQAGKG FFRRQEIHDL IALARVLADP RDTLALGALL RGPAIGLTDE ELLDLVDGLP RDPEHPESIP KLRLQVDVAH ISHPVARPVF ERLQVLAKRA LGTTPHDILS QAVDALMLRP VVRHRYDGHA ERALANIDLF LEMSRPYSVR GLRAFAGVMK ASWEGRTRAV EGRPDSQEAA VSLFTMHASK GLEWPVVIPI NTSTRTKAVT GALIDRTSNC LYCPVFGVRP VGYGEALENE KREVGNERVR LWYVAATRAR ETLVLPRFVE PGGSTSWSSV VDLGLDDLPA IDIDRLPTAP PPASTEPANA QTREVFAAEA DAVARRRRLS WVVPSRGEDA GTIACCPSDM VEEEVDVPPT AAAIPQGGRE RGILIHKLLE EILTGETGEV DLEGRAGVLA RQLGLRTKAT PDFALDLGEV AASVLRALSV PEIAGMRERL QPELPVFGFE SLADEDHATA GVADAIILDG LGRPDVVVDW KSDVDPSEAV IADYRCQVLR YLLATEARLG LLVFATSGRV VKVTLPP
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