| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_5303 |
|---|
| Symbol | |
|---|
| ID | 7118404 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 5680668 |
|---|
| End bp | 5681567 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643527996 |
|---|
| Product | porin |
|---|
| Protein accession | YP_002423993 |
|---|
| Protein GI | 218533177 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.381713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTATCG CGACCCTGGC TCTACTGACG ACCGTTCTGG TTTCACCCGC TCTCGCTGCC
GATCTCGATT ACGGCGTGCT GCGCGGCTAC GACGATGATT ACCCGGCACC GGCTCCGATC
ATCGACTGGA GCGGGTTCTA TGTCGGTGGG CATGGCGGAT ACTCGTCGGC TGCCCTCGGC
TTCGGCAACG CCTTCCAGCC AATCGTCGCA AACGCGCTCC GGTATACCGT CGCGGAGGCG
GAGATGAACG CATCTCATCT TCTCGCGGCA CGTGCTACCC ATTCTGGCGG GGCGAGCTAC
GGCGTGTTTG CCGGCGTCAA CTACCAGTTC GAAGATGTCG TCGTGGGCTT CGAGGCCGAT
TATACGTACT TTGGTCAGAG TGGAACCACT TCCGATCAAA TCGCCCGCTA CATGATCACG
AAGGACAACT TTCTTAGTAC TGTCAATCTG AGCGGCCAAG CCAGCACAAA AATACAAGAC
TATGGGACGA TCAGAGGCCG ACTTGGCTAC GCGTTTGGCA ATTTCCTTCC CTTCGTAACG
GGCGGCTTGG CACTCGGCCG GGCGACTGTC CGCGACACGG TTACAATTCA GGATTACGGC
TACAATAATA CAACTTACGC CGCCAATCAG ACGGGCACTA CGAAATCATA CATCGACAAC
GATGGCTACT CGGTCTTCTT CCAGAATAAT CCGCCCGGCA GCATCCCGGC GCCCGGTACA
GTTCACGGAA CCACGAAGAA GGTCACCGTA GCCGGCATCG CCGTCGGTGG TGGCCTCGAA
TACGCCATCA CGCCGAACTT CCTGCTCCGC GGCGAGTATC AATACGTCCT GTTCAACGAC
TTTCAGGGCC ATAAGGCCGA GTTGAACACC GTGCGTGGCG GCGCCGCCGT CAAGTTCTGA
|
|---|
| Protein sequence | MRIATLALLT TVLVSPALAA DLDYGVLRGY DDDYPAPAPI IDWSGFYVGG HGGYSSAALG
FGNAFQPIVA NALRYTVAEA EMNASHLLAA RATHSGGASY GVFAGVNYQF EDVVVGFEAD
YTYFGQSGTT SDQIARYMIT KDNFLSTVNL SGQASTKIQD YGTIRGRLGY AFGNFLPFVT
GGLALGRATV RDTVTIQDYG YNNTTYAANQ TGTTKSYIDN DGYSVFFQNN PPGSIPAPGT
VHGTTKKVTV AGIAVGGGLE YAITPNFLLR GEYQYVLFND FQGHKAELNT VRGGAAVKF
|
|---|
| |