Gene Mchl_5261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5261 
Symbol 
ID7113869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5633128 
End bp5635293 
Gene Length2166 bp 
Protein Length721 aa 
Translation table11 
GC content68% 
IMG OID643527954 
Productmethylmalonyl-CoA mutase 
Protein accessionYP_002423951 
Protein GI218533135 
COG category[I] Lipid transport and metabolism 
COG ID[COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit
[COG2185] Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) 
TIGRFAM ID[TIGR00640] methylmalonyl-CoA mutase C-terminal domain
[TIGR00641] methylmalonyl-CoA mutase N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.145645 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCCC GCATCCCCGA TTTCGCCTCC GTCGCCTACG CGGCCGACGG CTTCAAGGCG 
CCGCCCCCGC CGGCCGGGGA GCCGTGGATG ACGCCGGAGG GCATTCCGGT GAAGGGCTTC
TACGGCCCCG AGGACCGCGA GGGCTGCGAG GGGATCGACT CGTTCCCCGG CCTGCCGCCC
TACCTGCGCG GTCCCTATCC GGCGATGTAC GTGACCCAGC CCTGGACGAT CCGGCAATAT
GCCGGCTTCT CCACGGCCGA GGATTCGAAC GCCTTCTACC GGCGCAACCT CGCGGCGGGC
CAGAAGGGCC TCTCGGTCGC CTTCGATCTC GCCACCCACC GAGGCTACGA TTCGGACCAC
CCGCGCGTCT CGGGTGATGT CGGCATGGCG GGTGTCGCGA TCGACTCGAT CTACGACATG
CGCACGCTGT TCTCCGGCAT TCCGCTGGAC GAGATGACGG TGTCGATGAC GATGAACGGC
GCGGTGCTGC CGGTGCTCGC GCTCTACATC GTCGCGGCCG AGGAGCAGGG CGTGCCGCCC
GAGAAGCTCG CCGGCACGAT CCAGAACGAC ATCCTCAAGG AGTTCATGGT CCGCAACACC
TACATCTATC CCCCCAAGGG ATCGATGCGG ATCATCTCGG ACATCTTCGG CTACACCTCG
AAGAACATGC CGAAGTTCAA CTCGATCTCG ATCTCCGGCT ACCACATGCA GGAGGCCGGG
GCGACGCAGG ATCTGGAGCT CGCCTACACG CTCGCCGACG GCGTCGAGTA CATCAAGGCC
GGCCTCGCGG CGGGCCTCAC CATTGATCAG TTCGCCCCGC GCCTGTCCTT CTTCTGGGCG
ATCGGGATGA ACTTCTTCAT GGAGATCGCC AAGATGCGGG CCGCGCGCCT GATCTGGGCC
AAGCTCGTCA AGGAGTTCGA GCCGAAATCT GACAAGTCGC TGCCGCTGCG GACCCACTCG
CAGACGAGTG GCTGGTCGCT GACGGCGCAG GACGTGTTCA ACAACGTCAC CCGCACCTGC
ATCGAGGCGA TGGCGGCGAC GCAGGGCGGC ACCCAGTCGC TCCACACCAA CGCGCTCGAC
GAGGCTTTGG CGCTGCCGAC CGACTTCTCG GCGCGCATCG CCCGTAACAC CCAGCTCTTC
CTGCAGCAGG AGAGCGGCAC CACGCGGATC ATCGATCCGT GGGGCGGCTC CTACTATGTC
GAGCGGCTGA CCCGGGACAT CGCCGCGCGC GCCTGGGAGC ATATCCGCGA GGTCGAGGCG
CTCGGCGGCA TGGCGAAAGC CATCGAGGCC GGCATCCCGA AGCTGCGCAT CGAGGAGGCC
GCCGCCCGCG CCCAGGCGCG GATCGATTCC GGGCGCCAGA CCATCGTCGG CATCAACAAG
TACAAGCCTG ACGACGAGAT GAAGATCGAC CTGCTGCGCG TCGATAACGC CGACGTGCGC
GCCAAGCAGA TCGACAAGCT CAAGCGCCTG CGCGCCGAGC GCAACCAGGC CGACGTCGAT
GCGGCTCTGG CCGCGCTGAC GAAGGCCGCG GATGGCGAGG GCAACCTGCT CGAACTGGCG
GTGAACGCGG CGCGGGCCAA GGCCACGGTC GGCGAGATCT CGGAGGCGCT GGAGAAGGCT
TGGGGCCGTC ACCGCGCCGA GATCCGCTCG ATCTCGGGCG TCTACAAGCG GGAGGTGGGC
GGTATGTCGC CGGTGGTGGA GAAGGTCCGC GGCCTCGTCG AGGCCTTCGA GGAGAATGAC
GGGCGCCGCC CGCGCATCCT GGTCGCCAAG ATGGGCCAGG ACGGGCACGA CCGCGGCCAG
AAGGTGATCG CCTCGGCGTT TGCCGATCTT GGCTTCGACG TCGATATCGG GCCGCTCTTC
GCCACGCCGG ACGAGGCCGC GCGACAGGCG GTGGAGAACG ACGTGCACAT CGTCGGCGTC
TCCTCGCTGG CGGCGGGCCA CCTGACGCTG GTGCCGGAAC TCAAGGCCGC GCTGAAGCAG
GAGGGCCGCG ACGACGTGAT GATCGTGGTC GGCGGCGTGA TCCCGCCGGG CGACTACGAT
GCGCTCTACG CCGCGGGCGC CTCGGCGATC TTCCCGCCGG GCACCGTGAT CGCGGAAGCG
GCCGTGAAGC TTCTGGGCGA ACTCAACACG CGCCTGGGCT ACGGCGAGCG GCAAGCGGCC
GAGTAG
 
Protein sequence
MSSRIPDFAS VAYAADGFKA PPPPAGEPWM TPEGIPVKGF YGPEDREGCE GIDSFPGLPP 
YLRGPYPAMY VTQPWTIRQY AGFSTAEDSN AFYRRNLAAG QKGLSVAFDL ATHRGYDSDH
PRVSGDVGMA GVAIDSIYDM RTLFSGIPLD EMTVSMTMNG AVLPVLALYI VAAEEQGVPP
EKLAGTIQND ILKEFMVRNT YIYPPKGSMR IISDIFGYTS KNMPKFNSIS ISGYHMQEAG
ATQDLELAYT LADGVEYIKA GLAAGLTIDQ FAPRLSFFWA IGMNFFMEIA KMRAARLIWA
KLVKEFEPKS DKSLPLRTHS QTSGWSLTAQ DVFNNVTRTC IEAMAATQGG TQSLHTNALD
EALALPTDFS ARIARNTQLF LQQESGTTRI IDPWGGSYYV ERLTRDIAAR AWEHIREVEA
LGGMAKAIEA GIPKLRIEEA AARAQARIDS GRQTIVGINK YKPDDEMKID LLRVDNADVR
AKQIDKLKRL RAERNQADVD AALAALTKAA DGEGNLLELA VNAARAKATV GEISEALEKA
WGRHRAEIRS ISGVYKREVG GMSPVVEKVR GLVEAFEEND GRRPRILVAK MGQDGHDRGQ
KVIASAFADL GFDVDIGPLF ATPDEAARQA VENDVHIVGV SSLAAGHLTL VPELKAALKQ
EGRDDVMIVV GGVIPPGDYD ALYAAGASAI FPPGTVIAEA AVKLLGELNT RLGYGERQAA
E