Gene Mchl_5229 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_5229 
Symbol 
ID7113837 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5597021 
End bp5597470 
Gene Length450 bp 
Protein Length149 aa 
Translation table11 
GC content66% 
IMG OID643527922 
ProductBiopolymer transport protein ExbD/TolR 
Protein accessionYP_002423919 
Protein GI218533103 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID[TIGR02801] TolR protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.334933 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0672636 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCATGA CGCACGGCGC GGCACAGGGC GGCGGCAAGC GCCGCCGCCG CGGACGGCGC 
GGACACGGCG CCATCAACGA AATCAACATG ACGCCGTTCA TCGACGTGGT GCTGGTGCTG
CTGATCGTCT TCATGGTCGC CGCCCCGATG ATGACGGTCG GCGTGCCCCT CGACCTGCCG
CAATCGAAGG CGAGCCCGCT CAATTCCGAC GTCAAGCCGA TCACGATCTC GATCCGCCGC
ACGGGCGAGG TCTATCTCGG TGAGGTCGAG TTGAAGGACG ACGACATCGT GCCCCAGCTC
ATGCAGACCT CCAAGACCGG CACCGAGGAG CGGGTGTTCG TGCGCGGCGA CAAGCGCGTC
GATTACGGGC GCGTGGCCCA GGTGATGGCG ATCGTGACCG GCGGCGGCTT CAAGAAGGTC
GCCCTCGTCA CCGAGCCGGA AGCGAATTAG
 
Protein sequence
MGMTHGAAQG GGKRRRRGRR GHGAINEINM TPFIDVVLVL LIVFMVAAPM MTVGVPLDLP 
QSKASPLNSD VKPITISIRR TGEVYLGEVE LKDDDIVPQL MQTSKTGTEE RVFVRGDKRV
DYGRVAQVMA IVTGGGFKKV ALVTEPEAN