Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_4963 |
Symbol | |
ID | 7114960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 5298482 |
End bp | 5300341 |
Gene Length | 1860 bp |
Protein Length | 619 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 643527656 |
Product | glycoside hydrolase 15-related |
Protein accession | YP_002423656 |
Protein GI | 218532840 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0703179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.140371 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGAC GGATCGAGGA TTACGCCCTG ATCGGCGACG GGCGCACCGC GGCCCTGGTC GGGCGCGACG GCAGCATCGA CTGGCTGTGC ATGCCGCGCT TCGATGCCTC GGCCCTGTTC GCGAGCCTTC TCGGAACGGA GGAGCACGGC TTCTGGAAGC TCGCTCCGGC GGCGGAGGGG GCACAGCATT CCTGGCGCTA CCGCGGCGGC TCGCTGGTGC TGGAGACCAC GCACAAGACC CATGAGGGCG AGGTCCGCGT CACCGACTTC ATGCCCGTCG GCGACGGCAG CCACGTGATC CGCCTCGTCG AGGGCGTGCG CGGCCGGATG GCGATGCGGA TGGAACTGGC CGTGCGCTTC GATTACGGCT CGGCGGTGCC CTGGGTGTCG CGCAGCGAAC TCGGGGATCT GCGCGCCATC TCCGGGCCGC ACAAGGTGGT CCTGCGCACC AATGCGCCGA TGCGCGGCTC CGCCCACCAG ACCACGGTCT CGGAATTCAC GGTCTACAAG GGCGATGCGG TCCGCTTCGT GCTGAGCTAC GGCGCCTCGC ACGAGGACGA TCCTGCACCG ATCGAGCCGC GCCGCTGGCT CGACGACACC AACCGTTTCT GGCGCGAGTG GTCGAGCCGC TGCACGCTCC AGACGCCTTG GGACGCCATC CTGCGCCGCT CTCTCCTGAC GCTGAAGGCG CTGATCTACC AACCGACCGG GGGTATCGTC GCCGCGCCCA CCACGTCGCT GCCGGAAGAA CTCGGCGGGG TGCGCAACTG GGACTACCGC TTCTGCTGGC TGCGCGACTC GACCTTCACG CTGCTGGCGC TGATGGACTC AGGCTACATC GAGGAGGCCC GCGCCTGGCG CGACTGGCTG ACCCGGGCGG TGGCCGGCAA CCCGGAGCAG GCGCACATCC TCTACGGCAT CGCCGGCGAG CGGCTTCTGC CGGAGATCGA ACTCGACTGG CTGCCCGGCT ACGAGGGTTC GCGGCCCGTG CGCGTCGGCA ACGCGGCGAT CGCTCAGTTC CAGCTCGACG TCTACGGGGA GTTGTTCGAC GCCCTGTTCC AGGCCCGTGC CCGCGGCATG GGGCAGAACA AGGACGGCCT GCGCGTTGGC CAAGCGATCA TAAAGCACCT CGAGACGGCG TGGCGCCAGC CCGATGAGGG CATCTGGGAG GTGCGCGGCG GGCGGCGCCA CTTCGTCCAT TCCAAGGTGA TGGCCTGGGT GGCCTTCGAC CGGGCGATCC GCAGCGTCGA GCTGATGGGC GACGACGATC CGCACACCGT CGAAGCGCCG GTCGCGCACT GGCGGGCGAT CCGCGACGAG ATCCACGCCG AGGTCTGTGC CAAGGGGTTC GACCCGGAGC TGAACAGCTT CGTCCAATCC TACGGAAGCA AGGCGCTCGA TGCGAGCCTC CTGCTGATCG CGCATATGGG CTTCCTGCCC CAGGACGATC CCCGCGTCGT CGGCACGGTG GCGGCGGTCG AATCGCATCT GATGCGCGAG GGGTTCATCC TGCGCTACGA GACCGAAGGC CAGACCACCG ACGGCCTGCC CGGCAACGAG GGTGCCTTCC TGCCCTGCAG CTTCTGGTAT GCCGACAATC TGATCGGCCT CGGCCGCTGC GACGAGGCTC GCGACCTGAT CGAGCGCCTG ATCGGTGTCT GCACCGACCT CGGATTGGTC TCCGAAGAGT ACGACGTGCA CGCGAAACGG CTGGTGGGGA ACTTCCCTCA GGCGTTCACG CATGTTGCGC TCGTCAACAC GATCCTCAAT TACAGCCGCG CGACCGGTCC TGCGAAGGAA CGGGGCAGCG GCGCGGACGT ATCCGAGTCG AGGGTAGGCG AATCCATCGC GGCGCAGTAG
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Protein sequence | MAGRIEDYAL IGDGRTAALV GRDGSIDWLC MPRFDASALF ASLLGTEEHG FWKLAPAAEG AQHSWRYRGG SLVLETTHKT HEGEVRVTDF MPVGDGSHVI RLVEGVRGRM AMRMELAVRF DYGSAVPWVS RSELGDLRAI SGPHKVVLRT NAPMRGSAHQ TTVSEFTVYK GDAVRFVLSY GASHEDDPAP IEPRRWLDDT NRFWREWSSR CTLQTPWDAI LRRSLLTLKA LIYQPTGGIV AAPTTSLPEE LGGVRNWDYR FCWLRDSTFT LLALMDSGYI EEARAWRDWL TRAVAGNPEQ AHILYGIAGE RLLPEIELDW LPGYEGSRPV RVGNAAIAQF QLDVYGELFD ALFQARARGM GQNKDGLRVG QAIIKHLETA WRQPDEGIWE VRGGRRHFVH SKVMAWVAFD RAIRSVELMG DDDPHTVEAP VAHWRAIRDE IHAEVCAKGF DPELNSFVQS YGSKALDASL LLIAHMGFLP QDDPRVVGTV AAVESHLMRE GFILRYETEG QTTDGLPGNE GAFLPCSFWY ADNLIGLGRC DEARDLIERL IGVCTDLGLV SEEYDVHAKR LVGNFPQAFT HVALVNTILN YSRATGPAKE RGSGADVSES RVGESIAAQ
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