Gene Mchl_4892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4892 
Symbol 
ID7114313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp5203650 
End bp5205752 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content72% 
IMG OID643527585 
ProductPAS/PAC sensor hybrid histidine kinase 
Protein accessionYP_002423585 
Protein GI218532769 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.434534 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.941332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTTG CGGTGAGCGT GATGGGCCTG AGCATCGCCG CCGCGATGCT GGCGCTGATC 
CTGGTGTCGC TCCGCCGCCG CGAGCCCGTC GTGCCGGAAT CCGACATGAC GGAGGCGCTC
CAGGACCGGC TCTGGCAGAT CGCCGAGAGC GAGGAGCGCT ACCGGGTGCT GGTCGAGGCC
ACGACCGAGG CCGTGGTTCA ACGGGACGGG CAGGGGCGGA TCACCTTCGC CAGCGCGGGG
TTTGCCGCGT TGCTCGGCAT GAAGCCGCTG GAGTTGATCG GCTCGACGCT GAGCCCGCAG
GTGATCGAGC GCGGCGCGAG CGAGCAGCGC GCCGACGGCG TGCGGGTGGT CGAGGAGCGT
CTGGTGCCGG TGGACGGGCT GCCGCGCTGG TTCTCCTTCA TCGAGATGCC GGTCTCCGGC
AGCGTTGACG GTCCGAACTG GCTGCGGGCC GGCCAGGACG TCACCGCGCG CGTCGAGGCG
GCGCGTGTCC TCGACGAGGC AAAGAGCCGG GCGGAGGCCG CCAACGTCGC CAAATCCCGC
TTCCTCGCCA CCGTCAGCCA CGAGCTGCGC ACGCCGTTGA ACGGAATTCT CGGCATGGCC
GACCTGCTGC TCGACACCCG GCTCGACCCC GAACAGCGCA CCTATGTCGA GGCGTTCCGC
ACCAGCGGCA AGGCGCTGCT CGGCCTTGTC GACGGCATCC TCGATTTCTC CCGGATCGAG
GCCGGCCGCC TCGATCTGGC CGCCGAGCCC TTCGACGTCG CCGCCCTGGT CGAGGGCGTG
GTCGAGCTGC TGGCGCCGCG CGCGCAGGAC AAGGGCCTGG AAATCGCCCT CGACATCGCC
GACGACCTTG CCGCCCTGCG CGTGGGTGAT GCCGACCGGG TGCGGCAGAT CCTCGTGAAT
CTGGCCGGCA ACGCCATCAA GTTCACGCAG ACCGGCGGCG TCGGCGTCAG CCTCGCCCGG
TCGGGGGAGG AGCAGGGGGA AGGGCTCGTC CTCACGGTCG AGGATACCGG GCCGGGCATT
CCGGAGGAGC GCATCCCGAT CCTGTTCGAG GAGTTCGAGC AGGGCGACGA CAGCGCGAGC
CACGAGGGCA CCGGCCTCGG TCTGGCCATC ACCCGCCGCC TCGTGGAGCG CATGAACGGC
ACGATCGAGG CGCGCTCGAC GATGGGGCGC GGCTCGACCT TCCGGGTCAT GCTGCCGCTG
CCGGCGGCGG AGGGTGCGAT GAGCCCCGAG ACACCGAGCC TCGCACCGCG AAAGGTGCTG
ATCGTGGCGG CCTCGCCGTA TCAGGCGCCG TTCCTGGCCC GGCGGCTCAG CCGCTCCGGG
GCGGCGGCGG TGGTCGTGAA CAGCGCGGAG GCCGGCCTCG ATGCGCTGTC GGGCGTGGCC
TTCGACGCGC TCATCGCCGA CCGCAGCCTC GGCGACGCTG CCGTGCGGCG GCTCGCGGCC
GAGGCCGCCC GGAGCGGCGT GCGCTGCAGC CTGATCCTGC TCTCGCCCTT CGACCGGCGG
GAATTCGGCG CCCCGAACGC GGCGGGCTTC GACAGCTACC TGATCAAGCC GGTGCGCGCC
CGCTCGCTGT TCGACCGCCT GCTGGAGCCG CGGCCCACTC CGGCCCGCAG CCCGGCCGAC
GCGACGGCCC AGCCCGGTCC GGCCAAGACT GCATCGGGCA AGACTGCATC GGGCAAGACT
GCATCGAGCA AGACCGCACC CACCAAGACC GTCGCGCCGG GCCGCCGCGT GCTGCTGGCG
GAGGACAACC CGATCAACGC GCTGCTCGCC ACCAAGGCGC TGGAGCGGCT CGGCGCGCAG
GTGATCCACG CCCGCGACGG GCTCGAGGCT CTGGCGGCGG CGGAAGGGCA GGGGCCGTTC
GACCTCGCGT TGATCGACAT CCGCATGCCC GGCCTCGACG GCCTGGAAAC CGCCCGCCGC
ATCCGCGCCC GCGAGGCCGA GACCGGCGCG AGCCCGCTCC ACCTCGTGGC GCTCACCGCC
AATACCGGCC GCGAGGATGT CGACGCGGCC TCCGCGGCCG GCTTCGACGG CTTCCTGCCC
AAGCCGCTGA ACCTGCGCGC CCTGCCGGCT CTGCTGGACC GCCGCCAAGA GGAGGCAGCT
TGA
 
Protein sequence
MTLAVSVMGL SIAAAMLALI LVSLRRREPV VPESDMTEAL QDRLWQIAES EERYRVLVEA 
TTEAVVQRDG QGRITFASAG FAALLGMKPL ELIGSTLSPQ VIERGASEQR ADGVRVVEER
LVPVDGLPRW FSFIEMPVSG SVDGPNWLRA GQDVTARVEA ARVLDEAKSR AEAANVAKSR
FLATVSHELR TPLNGILGMA DLLLDTRLDP EQRTYVEAFR TSGKALLGLV DGILDFSRIE
AGRLDLAAEP FDVAALVEGV VELLAPRAQD KGLEIALDIA DDLAALRVGD ADRVRQILVN
LAGNAIKFTQ TGGVGVSLAR SGEEQGEGLV LTVEDTGPGI PEERIPILFE EFEQGDDSAS
HEGTGLGLAI TRRLVERMNG TIEARSTMGR GSTFRVMLPL PAAEGAMSPE TPSLAPRKVL
IVAASPYQAP FLARRLSRSG AAAVVVNSAE AGLDALSGVA FDALIADRSL GDAAVRRLAA
EAARSGVRCS LILLSPFDRR EFGAPNAAGF DSYLIKPVRA RSLFDRLLEP RPTPARSPAD
ATAQPGPAKT ASGKTASGKT ASSKTAPTKT VAPGRRVLLA EDNPINALLA TKALERLGAQ
VIHARDGLEA LAAAEGQGPF DLALIDIRMP GLDGLETARR IRAREAETGA SPLHLVALTA
NTGREDVDAA SAAGFDGFLP KPLNLRALPA LLDRRQEEAA