Gene Mchl_4680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4680 
Symbol 
ID7115248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4960273 
End bp4961025 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content74% 
IMG OID643527378 
Producthemolysin A 
Protein accessionYP_002423382 
Protein GI218532566 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.640566 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.901974 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGCG AGCGGCTCCG GGCCGATCGG TTCCTGGTCG AGCGCGGGCA TTTCCGCAGC 
CGGGCGCAGG CGCGGGCGGC GATCGAGGCC GGCCTCGTCA GCGCCGACGG CCGCCTCGTC
ACGCGCCCCG CGGATCTGGT CGAGTCCAGC GCCCGGATCG AGGCCTCGGC CCCCCACCCC
TACGTCTCCC GCGGCGGCCT CAAGCTCGCT GCGGCGCTCG ATGCCTTCGG CCTCGACCCC
GCGGGCCTCC CTTGCCTCGA TGTCGGCGCC TCGACCGGCG GCTTCACCGA CGTGCTGTTG
CGGCGCGGCG CCGCCCATAT CCACGCGGTC GATGTCGGCC GCGACCAGCT CGACGCCGCC
CTGCGCGCCA ACCCACGGGT GACCAGCCTG GAGGGCACCG ATATCCGCGC CCTCTCTCCG
GGGGCGATTC AGCCCGCGCC GCAGCTGGCC ACCATCGATG TGAGCTTCAT CGGCCTGCGG
CTGGTTCTGC CGGCTGTGGC GGCGCAGCTC GCCGACGAGG CCGCCATCGC CGCGCTGATC
AAGCCGCAAT TCGAGGCTGG CCGCGAGCGG GTCGGGCGCG GCGGCATCGT GCGCGACGCC
GAGGTTCATG CCGAGGTCTG CGAGGGCGTG CGCGCCGTGC TCGTCGGCCT CGGATTCACT
GTGTCGGGGC CGATCCCCTC CCCCATCGAG GGCGGCGACG GCAACCGCGA ATTCCTGGTC
GCCGCGAGGC GTTCCTCTGA TGATTGCCTC TGA
 
Protein sequence
MTGERLRADR FLVERGHFRS RAQARAAIEA GLVSADGRLV TRPADLVESS ARIEASAPHP 
YVSRGGLKLA AALDAFGLDP AGLPCLDVGA STGGFTDVLL RRGAAHIHAV DVGRDQLDAA
LRANPRVTSL EGTDIRALSP GAIQPAPQLA TIDVSFIGLR LVLPAVAAQL ADEAAIAALI
KPQFEAGRER VGRGGIVRDA EVHAEVCEGV RAVLVGLGFT VSGPIPSPIE GGDGNREFLV
AARRSSDDCL