| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4532 |
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| Symbol | |
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| ID | 7118497 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | + |
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| Start bp | 4800302 |
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| End bp | 4803892 |
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| Gene Length | 3591 bp |
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| Protein Length | 1196 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 643527231 |
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| Product | transcription-repair coupling factor |
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| Protein accession | YP_002423236 |
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| Protein GI | 218532420 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1197] Transcription-repair coupling factor (superfamily II helicase) |
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| TIGRFAM ID | [TIGR00580] transcription-repair coupling factor (mfd) |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.850755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAAGC CCCAACCCAA GCCACCCGCT CCGAAGCCGC AGACCGCGCG CTTCGCCCTG
CCGAAATCGG CGCCGCTCAC CAAGGCGCTC GATGCGATCA AGCGCGGCGA CAGCCCAACG
CTGGCGAGCG TCCCCGACGG CTTCGATGCG CTGGTGGCCG CCGACCTCGC CCGCGCGCTG
TCCGGTTCGT TCGAGGGGCC GGCGGTGCTG GTCCACGTCG CCCGCGATTC CGGCCGCTCC
AACGCCTTCC AGAACGCGCT GAAGTTCGTC GCCCCCGAGA TCGAGGCGAT GAGCGTTCCG
GCCTGGGACT GCCAGCCCTA CGACCGGGTG TCGCCGAACG GGGCCATCGC CGCCCAGCGC
ATGACCGCGC TGTCGCGGCT GACCCGTTCG CGCTCGTCGG AGGAGAAGCC GCGCATTCTC
TGCACCACCG TCAACGCTCT GGTGCAGCGG GTGCCGCCGC GGTCGCGCGT GGCCGTCGAG
ACCTTCTCGG CGGCGATCGG CAACGTGGTG CCGATGGACA AGGTCGTGGC CTGGGTGGAA
GCGAACGGCT TCCTGCGCAC GGGAACGGTG CGCGATACGG GCGAATACGC CGTGCGCGGC
GGCATCCTCG ACCTGTCGCC CCCCGGCCTG CCGAACCCGA TCCGCCTCGA CTTCTTCGGC
GACACGCTCG AATCGATCCG CGCCTTCGAT CCCGAGACGC AGCGCACGGT GGGGTCCCTC
CGCTCTCTCG ACCTCGTGCC GATGAGCGAG GTGCAGCTCA CCACCGAGAC GATCCGGCGC
TTCCGGCAAG GCTACCTGTC GAGCTTCGGC GCGGCGACCC GCGACGACCG GCTCTACGAG
ACGGTGAGCG AGGGCCGGCG CTATGCCGGC CTCGAGCACT GGATGCCGCT GTTCTACGAC
GGCCTCGACA CCCTGTTCGA CTATCTCGGC GACGTGCCGA TGCTGTTCGA CCCGCAGGTG
GAGGAGGCGG CCACCGAGCG GCTCGCCCTG ATCCAGGACT ATTTCCAGGC CCGCGAAGCG
GCGCTCAAGA ACCCGCAGAG CGGCGTCGCG CCCTACAAGC CGCTGCCGCC GCGCGCGCTC
TACCTCACGC CCAACGAATG GAAGAGCAAG GTCGAGTCCG GCACGGTGGT CCGGCTCACC
CCCTTCGCGA CGCCGGATTC CGACGAGCGC GCGGTGATCG ATTGCGGCGC CAAAGCCGGG
CGAAGCTTCG CGCCTGAGCG GGCCGACGAC GCGGCCAGCG TGTTCGACGC GGCGGTCGCG
CATATCCGGG ATCTCCAGGC ATCCGGGCAT CACGTGATCC TTGGATCCTG GTCCGAAGGC
TCGCGCGACC GGCTCTGCGG CGTGCTGACC GACCACGGGC TCAAGAAGCC GACGGTGATC
AACACCTTCG CCGCGGTCAA CGCGCTCAAG CGCGGCACCG ATGTGGCGGT CGCGGTCTGG
GGGCTGGAAT CCGGCTTCAC CCTCGATCGG CTCGCGGTGG TGGCCGAGGG CGACATCCTG
GGCGACCGGC TGGTGCGCCA GAAGCGCAAG TCCAAGCGCC CGCAGGACAT CATCCTGGAG
GTGCAGGCGC TCCAGCCCGG CGATCTCGTG GTCCATGCCG ACCACGGCAT CGGCCGCTTC
GTCACGCTCA AGACGGTCAC GGCAGCGGGC GCGCCGCATG ACTGCCTCGA ACTGCAATAT
GCCGGCGGCC TGCTGCTGCT GCCGGTCGAG AACATCGAGC TCCTGACCCG CTACGGCTCC
GAGGATTCGG AGGTCGCGCT GGACCGCCTG GGCGGTGGCG CCTGGCAGGC CCGCAAGGCC
AAGATGAAGC GCCGCATCCT CGAGATGGCC GGCGACCTCA TCAAGATCGC CGCCGCGCGG
TTCGTGAAGT CCGCCCCCAG CCTCAAGGCG CCGGAGGGGC TCTACGAGGA ATTCGCCGCC
CGCTTCGCCT TCCAGGAGAC CGAGGATCAG GCCAGCGCCA TCGACGCGGT GCTCGACGAC
CTCAATGCGG GGCGTCCGAT GGACCGGCTC GTCTGCGGCG ATGTCGGCTT CGGCAAGACC
GAGGTGGCCC TGCGCGCCGC CTTCGCCGCG GCGATCTCCG GCAAGCAGGT GGCGGTGGTG
GTGCCCACCA CGCTGCTGGC CCGCCAGCAT TTTCGCACGT TTGCCGAACG GTTTAAGGGG
CTGCCGATCA ACGTCGCGCA GCTCTCGCGC TTCGTCTCGG CGGGCGAACA GCGCCAGAAC
CGGGCCGGGC TCGCCGACGG GACGGTCGAC ATCGTCGTCG GCACCCATGC CCTGCTCGCC
AAGAACGTCG CGTTCAAGGA TCTCGGCCTC ATCATCGTCG ATGAGGAGCA GCATTTCGGC
GTCGCCCACA AGGAGCGGCT CAAGGCGCTC CAGGCCGACG TGCACGTGCT GACGCTCTCG
GCCACCCCGA TTCCGCGCAC GCTGCAGCTC GCCATGACGG GTGTGCGCGA ACTCTCGATC
ATCGCCACGC CCCCGATGGA CCGGCTGGCG GTGCGCACCT TCGTCACGCC GTTCGATCCG
CTGCTGGTCC GCGAGGCGCT GCTGCGCGAA CGCTATCGCG GCGGTCAGTC GTTCTACGTC
GCGCCGCGCA TCGAGGACCT GGCCGAGGTC AAGCGCTTCC TCGACACCGA GATGCCCGAG
ACCACCGTCG CGGTCGCCCA CGGCCAGATG GCGGCGGGCC AGCTCGAGGA CGTGATGACG
GCGTTCTACG AGGGCAAGTA CGACGTGCTG CTCTCGACCA CGATCGTCGA ATCCGGCCTC
GACATCCCGA CCGCCAACAC GCTGATCGTG CACCGGGCCG ACATGTTCGG TCTGGCCGCG
CTCTATCAGT TGCGCGGGCG CGTCGGCCGC TCGAAGGCGC GGGCCTACGC CCTGTTCACG
ACGCCGGCCA ACCGCCAGCT CACGACCCAG GCCGAACAGC GCCTGAAGGT GCTCCAGAGC
CTCGACACGC TGGGCGCCGG CTTCCAGCTC GCGAGCCACG ATCTCGATAT CCGCGGCGCC
GGCAACCTCC TGGGCGATGC CCAGTCCGGC CACATCAAGG AAGTCGGCTA CGAGCTCTAC
CAGCAGATGC TGGAGGATGC GGTCACCGCC CTCAAGGCCG GCATCGAGGA GCCGGTGGAG
GAGGCGTGGT CGCCGACCAT CGCGCTCGGC GCTCCGGTCA CGATTCCCGA GGACTACGTC
GAGGATCTGA CCGTCCGGCT CGGCCTCTAC CGGCGCCTCT CGACCCTCGA GAACGATGCC
GAGATGGAGA GCTTCGGTGC CGAGCTGATC GACCGCTTCG GCCCGCTGCC GCCGGAGGTG
GAACAGCTCC TGAAGATCGT GACCATCAAG ATTTTGTGCC GCGACGCCAA TGTCGAGAAG
GTCGAGGCCG GGCCGAAGGG CGTGGTGGTT CACTTCCGCA ACCGCTCCTT CGCCAACCCG
CAGGGGCTCG CCGCCATGGT CGTGGAGCAG GGCTCGTTCG CCAAGGTGCG GCCCGACATG
AGCGTCGTGT TCATTCGCGA ACTCGACGGC ATCCCGCGGC GGCTGAAGGA GACGACGCAG
ATCCTGCGTG GGCTCGTCAC GATTGCCAAG CGGGCCAAGA AGGCCGCCTG A
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| Protein sequence | MAKPQPKPPA PKPQTARFAL PKSAPLTKAL DAIKRGDSPT LASVPDGFDA LVAADLARAL
SGSFEGPAVL VHVARDSGRS NAFQNALKFV APEIEAMSVP AWDCQPYDRV SPNGAIAAQR
MTALSRLTRS RSSEEKPRIL CTTVNALVQR VPPRSRVAVE TFSAAIGNVV PMDKVVAWVE
ANGFLRTGTV RDTGEYAVRG GILDLSPPGL PNPIRLDFFG DTLESIRAFD PETQRTVGSL
RSLDLVPMSE VQLTTETIRR FRQGYLSSFG AATRDDRLYE TVSEGRRYAG LEHWMPLFYD
GLDTLFDYLG DVPMLFDPQV EEAATERLAL IQDYFQAREA ALKNPQSGVA PYKPLPPRAL
YLTPNEWKSK VESGTVVRLT PFATPDSDER AVIDCGAKAG RSFAPERADD AASVFDAAVA
HIRDLQASGH HVILGSWSEG SRDRLCGVLT DHGLKKPTVI NTFAAVNALK RGTDVAVAVW
GLESGFTLDR LAVVAEGDIL GDRLVRQKRK SKRPQDIILE VQALQPGDLV VHADHGIGRF
VTLKTVTAAG APHDCLELQY AGGLLLLPVE NIELLTRYGS EDSEVALDRL GGGAWQARKA
KMKRRILEMA GDLIKIAAAR FVKSAPSLKA PEGLYEEFAA RFAFQETEDQ ASAIDAVLDD
LNAGRPMDRL VCGDVGFGKT EVALRAAFAA AISGKQVAVV VPTTLLARQH FRTFAERFKG
LPINVAQLSR FVSAGEQRQN RAGLADGTVD IVVGTHALLA KNVAFKDLGL IIVDEEQHFG
VAHKERLKAL QADVHVLTLS ATPIPRTLQL AMTGVRELSI IATPPMDRLA VRTFVTPFDP
LLVREALLRE RYRGGQSFYV APRIEDLAEV KRFLDTEMPE TTVAVAHGQM AAGQLEDVMT
AFYEGKYDVL LSTTIVESGL DIPTANTLIV HRADMFGLAA LYQLRGRVGR SKARAYALFT
TPANRQLTTQ AEQRLKVLQS LDTLGAGFQL ASHDLDIRGA GNLLGDAQSG HIKEVGYELY
QQMLEDAVTA LKAGIEEPVE EAWSPTIALG APVTIPEDYV EDLTVRLGLY RRLSTLENDA
EMESFGAELI DRFGPLPPEV EQLLKIVTIK ILCRDANVEK VEAGPKGVVV HFRNRSFANP
QGLAAMVVEQ GSFAKVRPDM SVVFIRELDG IPRRLKETTQ ILRGLVTIAK RAKKAA
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