| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4475 |
|---|
| Symbol | |
|---|
| ID | 7118440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 4737488 |
|---|
| End bp | 4739251 |
|---|
| Gene Length | 1764 bp |
|---|
| Protein Length | 587 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643527174 |
|---|
| Product | PAS/PAC sensor hybrid histidine kinase |
|---|
| Protein accession | YP_002423179 |
|---|
| Protein GI | 218532363 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACTG AGCCCGACGC CACGGCTTTG GACGAGGCGC AAGCGCGCAT CCGCGCGCTG
GAAACGCGGT TGGAGGAGGT CGAGGACACC CTGGCGGCGA TCCGCCGGGG CGATTTCGAT
GCGATCGTGG TCGAGGGACC GAGCGGCGAG CGGCTGGTCT ACACCCTGGA GAATGCCGAC
CGGCCCTACC GGGTGCTGAT CGAGCAGATC CAGGAGGGGG CCTTCACCCT CGGGCCGGAT
GGAACGCTGC TCTACTGCAA CCGCCGGCTC GCCGAGACCC TGGGCACTCC ACAGGAGCGC
CTGATCGGCC AGCCCTTCGC GCGCTTCGCC GCCGGGGGCC AGGACGCGGC GCTCGCCGCC
CTGATCACGC AGGCGGCGCG GATGCCGGCC CGCGGCGAGA TCGCCCTGTG CGACGAGGCG
GGGGTCGAGC GCCCGGCCTA CCTGTCGCTG AACCGCCTCG ACGGCGACGG CGACACCCTG
CTCCTTTGCG GCGTGATCAC CGACCTCACG GCGGAGCGGC TGCGCCTGCA CGAACTCGCC
GAGGCTAACG AGCGCCTGCG CGCCGAGGTG GCCGAGCGCG AGCGGATCGA GGAGGCATTG
CGCCAGAGCC AGAAGATGGA GGCGGTGGGC CAGCTCACCG GCGGCGTCGC GCACGACTTC
AACAACCTGC TCACCGTCAT CAAGTCCTCC ACCGACCTGC TCAAGCGCCC CGATCTCGCC
GAGGAGCGCC GCCGCCGCTA TGTCGACGCC ATCTCCGACA CGGTGGCACG GGCGGCCAAG
CTGACCGGCC AGCTCCTCGC CTTCGCCCGG CGCCAAGCCT TGAAGCCCGA GGTGTTCGAT
GCCGGCCGCG GCGTCGCGTC GGTGGCCGAC ATGGTCGGCA CGCTCACCGG CGCGCGCATC
CAGGTGAAGA CCTTGATCGA GCCCTGTTTC GACGCCGCGG GCGAGCCCTT CGCCTGCCTC
GTGGAGGCCG ATCCGAGCCA GTTCGACACA GCGCTCGTCA ACATGGTCGT CAACGCCCGC
GACGCCATGG ACGGCGAGGG CACGCTCACC ATCCGCGTCG GCCATGCCGG GCAAATTCCG
GCCCTGCGCA CCCATCCGGC CGTGCCCGGC GACTTCGTGG CGGTGGCGAT TTCCGACACG
GGGACGGGCA TCGCGCCCGC CGACCTGTCG CGGATCTTCG AGCCGTTCTT CACGACGAAG
GGCGTCGGCC AGGGCACCGG GCTCGGGCTG TCCCAGGTGT TCGGCTTCGC CAAGCAATCG
GGCGGCGACA TCGCGGTGGA GAGCGTGCTG GGACAGGGCA CGACCTTCAC CCTGTTCCTG
CCGCGGGCCA AGGTCGCCCC GACGATGGTC GAGTCCGCCG ACGAGCCCGA GCCGCTGGCC
CCCGGCCACG GCACCTGCGT GCTTCTCGTC GAGGACAACC GCGAGGTCGG CGCCTTCGCG
ACGCAGGCGC TGGCCGAACT CGGCTACGGC ACCGTCTGGG CGATGGATGC GGAGCAGGCG
CTGGCCGAAC TCGACCGGAC GCCGGAGCGC TTCGACGTGG TGTTCACCGA CGTGGTGATG
CCCGGCATGA ACGGGGTCGA ACTCGCCCGC ACGATCCTGG GGCGGACGCC GGGCATGCCG
ATCGTGCTCT CCTCCGGCTA CAGCCACGTG CTGGCCGAGG ACGGGCACCA CGGCTTCCCG
CTGCTGCACA AGCCCTACTC GGTGGAGGAT CTCTCGCGCA TCCTGCGCCG GGCGATCCAG
CGGCGCGCCG CGCGGGCGCG GTGA
|
|---|
| Protein sequence | MSTEPDATAL DEAQARIRAL ETRLEEVEDT LAAIRRGDFD AIVVEGPSGE RLVYTLENAD
RPYRVLIEQI QEGAFTLGPD GTLLYCNRRL AETLGTPQER LIGQPFARFA AGGQDAALAA
LITQAARMPA RGEIALCDEA GVERPAYLSL NRLDGDGDTL LLCGVITDLT AERLRLHELA
EANERLRAEV AERERIEEAL RQSQKMEAVG QLTGGVAHDF NNLLTVIKSS TDLLKRPDLA
EERRRRYVDA ISDTVARAAK LTGQLLAFAR RQALKPEVFD AGRGVASVAD MVGTLTGARI
QVKTLIEPCF DAAGEPFACL VEADPSQFDT ALVNMVVNAR DAMDGEGTLT IRVGHAGQIP
ALRTHPAVPG DFVAVAISDT GTGIAPADLS RIFEPFFTTK GVGQGTGLGL SQVFGFAKQS
GGDIAVESVL GQGTTFTLFL PRAKVAPTMV ESADEPEPLA PGHGTCVLLV EDNREVGAFA
TQALAELGYG TVWAMDAEQA LAELDRTPER FDVVFTDVVM PGMNGVELAR TILGRTPGMP
IVLSSGYSHV LAEDGHHGFP LLHKPYSVED LSRILRRAIQ RRAARAR
|
|---|
| |