Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_4273 |
Symbol | |
ID | 7117507 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 4510674 |
End bp | 4511300 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643526971 |
Product | Nicotinamidase |
Protein accession | YP_002422977 |
Protein GI | 218532161 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1335] Amidases related to nicotinamidase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00705625 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGCTCA CAAACACCGA CGTTCTGCTC ATCATCGACG TGCAGAACGA TTTTCTGCCC GGCGGGGCGC TCGCGGTGCC CGACGGCGAT GCCGTCGTCG CCCCGATCAA CCGGCTGGCC GCGTGCGTTC CCCACGTCAT CCTGACCCAG GACTGGCACC CGCCCGGCCA TGCCTCGTTC CACGGCAGCC ATCCGGGCAA GGCCCCCTTC GACACCACGG ACCTGTCCTA CGGTGAACAG GTGCTCTGGC CGGAGCACTG CGTGCAGGGC ACCCACGGTG CCGAGCTGGC CGCTGGCTTG AACACGGAAC GGGCCGAGCT GGTGATCCGC AAGGGCTACC ACCCCGGCAT CGACAGCTAC TCGGCCTTCA TGGAAGCCGA CCGGCGGACC CGCACGGGGT TGGCCGGCTA CCTCGCCGAG CGCGGCCTGA CCCGCCTGTT CCTCGCCGGC CTCGCCACCG ATTTCTGCGT GCTCTGGACC GCGCTGGATG CCCGCGCCGC CGGGTTCGAG GCCTTCGTGA TCGAGGATGC CGTGCGCGGC ATCGATCTCG ACGGCTCGCT GGCGCGGGCC TGGGCGGCGA TGGAAGCGGC AGGGGTCGGG CGCATCGCCA GCACGGCGCT CGGCTGA
|
Protein sequence | MMLTNTDVLL IIDVQNDFLP GGALAVPDGD AVVAPINRLA ACVPHVILTQ DWHPPGHASF HGSHPGKAPF DTTDLSYGEQ VLWPEHCVQG THGAELAAGL NTERAELVIR KGYHPGIDSY SAFMEADRRT RTGLAGYLAE RGLTRLFLAG LATDFCVLWT ALDARAAGFE AFVIEDAVRG IDLDGSLARA WAAMEAAGVG RIASTALG
|
| |