| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_4170 |
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| Symbol | |
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| ID | 7115295 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | - |
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| Start bp | 4396389 |
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| End bp | 4398413 |
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| Gene Length | 2025 bp |
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| Protein Length | 674 aa |
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| Translation table | 11 |
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| GC content | 76% |
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| IMG OID | 643526884 |
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| Product | RNA-binding S4 domain protein |
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| Protein accession | YP_002422892 |
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| Protein GI | 218532076 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA TTCCAGACCC CTCCCCGGCC GTGCCCGCGG ACCAACCCGC CGCGCCCGAG
GGCGAGCGCA TCGCCAAGGC CATCGCCCGC GCCGGCATCG CTTCCCGCCG CGACGCGGAG
GCCCTGATCG AGGCCGGCCG CGTCACCCTC AATGGCAAGG TTTTGACCTC GCCGGCGATC
AACGTCACCG ATTCCGATCG CATTACGGTG GACGACGAGC CCCTGCCCGC CCGCGAGCGG
ACCCGGCTGT GGCTGCTGCA CAAGCCGCGC GGCGTCGTCA CCACCGCCCG CGACCCGGAG
GGCCGCCCGA CGGTGTTCGA CGGCCTGCCC GAAGAGCTGC CGCGGGTCGT CGCCATCGGC
CGGCTCGACA TCAACACCGA AGGGCTGCTG CTCCTCACCA ATGACGGGGG GCTGGCCAAG
GTGATCGCCC ATCCCGATAC CGGCTGGCTG CGCCGCTACC GGGTGCGCGC CTTCGGTGAC
GTGACCCAGC CCGATCTCGA CAAGCTCAAG AAGGGCCTGA CCGTCGACGG CATGGAGTAC
GGCCCGATCG AGGCGACCCT CGACCGGGCG CAGGGCGACA ACGTCTGGCT GACGCTCGGC
CTGCGCGAGG GCAAGAACCG CGAGGTCAAG CGCATCCTCG AGCATCTCGG CCTGTCGGTG
AACCGGCTGA TCCGGCTCTC GTTCGGACCG TTCCAACTCG GCGACCTCGA AGTCGGCCTC
GTTGAGGAGA TCCGCACCAA GGTTCTGAAG GACCAGCTCG GAAAGAACCT CGCCGAGCAG
GCCGGCGTCG ATTTCGAGAG CCCGGTGCGC GAGACGATCG CCCCCTTCGG CAGCCCGAAG
AAGGCCACCC GCGCCACGCA GGCGGCGCCC GCAGGACGGG GCCGTCAAGG CGCGCGCGAC
GAGGGCGCCT CGGAGCCCCG CTCGGGGTCT CGCGGCGGCT CGGCCGGCCG TCCGCCGCGC
GATCCCGCCC GCCCTGCCGC CCCCCGCGCC GGGGCACGCC CGGCCCCGCG TCCCCCTTCC
CCGACCGTGT GGCGCGCCGA CGAGGAGACG CGGCCTCGCG CCTCGAAGGT GCCGCGCCGG
GGCATGGACC CCAAGACCGC CCGCGCGGCG GCGGCCGAGC GCGGCCGCGA GCGGGTCGGC
GCGATCCAGG CGGCCGGCGA GCGCCGGGTG CTGGTGGAGC GGCTTCAGCC CTCGCCAGAG
AAGCCCGCAC CCGAGCCGCA TCGCCGGGTC CGCTTCCGCA ACGAGGAGGA GCGGTCCGCG
CCCCGCGACA GGGCGCGCGA AGACAGGCCG CGCCAGGATC GGCCAGGTCA AGATCGGCCG
CGTGAAGACC GGCCGCGCGA TGACAGGCCG CGCAGCGAGG GACCGCGCGA GAACCGCGCC
CGCGACGAGC GGCCGGGCCG GGACGAGTTC CGACGCGGCG CACCCGCGGG CGATGCCCGT
CCCCGCCGCC GTGAGGCCGG GGAGGCCGCA CCGGCCGAGC GGCGCGGGCC GCCCCGCGAG
CGTCCGTCCG ATTTCGAGGG GAGTCCGCCG CGCGAGCGGA GCGAGGGCCG GCCCCAGCGT
GACTTCCATG GTGACTCCCG TGAGCGCGGC GAGGGCGCAC CCCGCCGCGA GCGGCCGAGC
GAAGGGCGCC CGCCCGAGCG TCGCGGCCCC CCGCGCGACC GGCCCCGTGC CGCCGAGGGC
GAGCGGCCGG CCCGCCCCCC GCGCAGTGCC GAGGCGTCCG ATCGTCCCGC CTTCCGCAAG
GGCCCCGGCA AGGGGCCCGG TGGTGGTGCA GGCAAGAGCT TCGGCGGCAA GCCCGGCTTC
AAGGGCGGTG ACCGCGACGG CGCCAGGGGC GATTTCAAGG GCGGCGCGAA AGGTGGCCCG
CGGGGCGACT TCAAGCCCGG TGGCGGCGGC CGGCCTGGTG GGCGCCCGGG CGGACGTCCC
GGCGGCAAGC CCGGCGGTGC CCCCGGGGGA CGCCCCGGCG GTGGCGGCAA GCCGGCACCG
CGCGGGGGCG GCCGTCCGAG CCGTCCGCCG CGTGGCGAGG GCTAA
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| Protein sequence | MTDIPDPSPA VPADQPAAPE GERIAKAIAR AGIASRRDAE ALIEAGRVTL NGKVLTSPAI
NVTDSDRITV DDEPLPARER TRLWLLHKPR GVVTTARDPE GRPTVFDGLP EELPRVVAIG
RLDINTEGLL LLTNDGGLAK VIAHPDTGWL RRYRVRAFGD VTQPDLDKLK KGLTVDGMEY
GPIEATLDRA QGDNVWLTLG LREGKNREVK RILEHLGLSV NRLIRLSFGP FQLGDLEVGL
VEEIRTKVLK DQLGKNLAEQ AGVDFESPVR ETIAPFGSPK KATRATQAAP AGRGRQGARD
EGASEPRSGS RGGSAGRPPR DPARPAAPRA GARPAPRPPS PTVWRADEET RPRASKVPRR
GMDPKTARAA AAERGRERVG AIQAAGERRV LVERLQPSPE KPAPEPHRRV RFRNEEERSA
PRDRAREDRP RQDRPGQDRP REDRPRDDRP RSEGPRENRA RDERPGRDEF RRGAPAGDAR
PRRREAGEAA PAERRGPPRE RPSDFEGSPP RERSEGRPQR DFHGDSRERG EGAPRRERPS
EGRPPERRGP PRDRPRAAEG ERPARPPRSA EASDRPAFRK GPGKGPGGGA GKSFGGKPGF
KGGDRDGARG DFKGGAKGGP RGDFKPGGGG RPGGRPGGRP GGKPGGAPGG RPGGGGKPAP
RGGGRPSRPP RGEG
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