Gene Mchl_4070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_4070 
Symbol 
ID7114376 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4291777 
End bp4292991 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content67% 
IMG OID643526789 
Productpolyhydroxyalkanoate depolymerase, intracellular 
Protein accessionYP_002422798 
Protein GI218531982 
COG category[I] Lipid transport and metabolism 
COG ID[COG4553] Poly-beta-hydroxyalkanoate depolymerase 
TIGRFAM ID[TIGR01849] polyhydroxyalkanoate depolymerase, intracellular 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCTACC AAGCCCTCGA TGTCCAATCG GACATCGCCC GGCAGACCCG CCAATGGGGC 
CGCCTGCTGC AGGAAGCCTC CGCGCCGTGG ATGCGGACGC CCTGGCACGA CGCCGCGAAA
TGGTGGTCGG CGGGCGCGCG CATGATGATG CGCGCCGGCC TCACCTTCGC GCGGCCGGCC
TATGGCATCC ACGCCGTCAT GGTCGGCAAC CGCGAAGTGC CGGTGATCGA GGAGCCGGTG
CTCGCCACGC CCTTCGGCAC GCTGCTCCGC TTCCGCAAGG ACATCGACAC CGTCCAGCCC
AAGGTGCTGG TGCTCGCCCC CCTCTCGGGC CACTTCGCCA CGCTGCTGCG CAGCACCGTG
CGCACGCTGC TGCCCGACCA CGACGTCTAC ATCACCGACT GGCACAACGC CCGCGACGTG
CCCCTTTCGG AAGGGCGGTT CGGCTTCGAC GACTACGTCG ATCACGTCGT GCGCTTTCTG
GAGACCATCG GCGAGGGCGC CCACCTCATG GCCGTGTGCC AGCCCGCGGT GCAAGCGCTC
GCGGCCACGG CGCTGATGGC GCACACCAAG AATCCGGCAC AGCCGCGCAG CATGACCCTG
ATGGCCGGAC CGGTCGATTG CCGCGTCAGC CCGACCTCGG TGAACCGGCT CGCCGTCTCG
AAGCCGATCG AGTGGTTCGA GAAGAACCTG ATCGAGACGG TGACCGGACG CCACAAGGGG
GCGGGGCGGC GGGTCTATCC CGGCTTCACG CAGGTCTCCG CCTTCGTTTC GATGAATGCC
AAGCGCCACC GGGACGCGCA TACGGATCTG TTCTGGCACT ATGTCGACGG CAGCGCCGAC
AAGGCGCAGG CGATCGAGAC CTTCTACGAC GAGTATTTCG CCGTCCTCGA CCTCGCCGCC
GAATTCTACC TCGAGACGGT CAAGATCGTC TTCCAGGACT ACACCCTGGC CCGCAACCAG
CTCACCTATC GCGGCGAGCC CATCGATATG GGCGCGATCC GGCGCACCGC CCTGATGACA
GTGGAAGGCG AGCGCGACGA CATCTGCGCC GTGGGCCAGA CCATGGCCGC CCACGACCTC
TGCTCAAGCC TGCCGCCGCA CATGAAGACC CACCACCTCC AAACCGGCGT GGGTCACTAC
GGCGTGTTCT CGGGCCGGAA GTGGGAGGCG CAGACCTATC CGCTCGTGCG CAACTTCATC
GCCTCGCACG CCTGA
 
Protein sequence
MLYQALDVQS DIARQTRQWG RLLQEASAPW MRTPWHDAAK WWSAGARMMM RAGLTFARPA 
YGIHAVMVGN REVPVIEEPV LATPFGTLLR FRKDIDTVQP KVLVLAPLSG HFATLLRSTV
RTLLPDHDVY ITDWHNARDV PLSEGRFGFD DYVDHVVRFL ETIGEGAHLM AVCQPAVQAL
AATALMAHTK NPAQPRSMTL MAGPVDCRVS PTSVNRLAVS KPIEWFEKNL IETVTGRHKG
AGRRVYPGFT QVSAFVSMNA KRHRDAHTDL FWHYVDGSAD KAQAIETFYD EYFAVLDLAA
EFYLETVKIV FQDYTLARNQ LTYRGEPIDM GAIRRTALMT VEGERDDICA VGQTMAAHDL
CSSLPPHMKT HHLQTGVGHY GVFSGRKWEA QTYPLVRNFI ASHA