| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3986 |
|---|
| Symbol | |
|---|
| ID | 7117185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 4192204 |
|---|
| End bp | 4193355 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 643526710 |
|---|
| Product | DegT/DnrJ/EryC1/StrS aminotransferase |
|---|
| Protein accession | YP_002422719 |
|---|
| Protein GI | 218531903 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCGC TGGCGATCCC GAACCTCGCC GGGCGGGAGG CGGAGTACCT GCAGGAATGC
GTCGCCACGA CCTTCGTATC CACCGTCGGC CCCTTCGTGG GCCGGTTCGA AGCGGCGGTG
GCGGCGGCGG CGGGCGCCGA GGCCGCGGTG TCCACGAGCG CCGGCACGAC GGCGATCCAC
GCCGCCCTCG TGGCGCTGGG CGTCGAGCGC GACGACCTCG TGATCGTGCC CGCACTGACC
TTCATCGCCA CTGTCAGCGG CATCCATTGG GCCGGGGGTC GGCCCTGGTT CGCGGAGAGT
GCGCCGGAGA GCTGGACCCT CGATCCCGGT CGCATCGAGA CGTTGCTCGC CCGCGAGGTC
GTCATGGACG GGACAGGCGT CGCTCGACAC CGCGCGACGG GCCTTCGCGT GAAGGCGATG
GTTCCCGTCT ACACGCTCGG CAACCCGCCC GACATGGATC GGCTGGTCGA GGTCGCACGG
CGTTACGGCC TGAGCATCCT CGCCGACGCC GCCGCCGCGC TCGGCGCCAC CTACCGTGGT
CGTCCGCTCG GCGAGTTCGG CGCCGACCTC TCGATCATCT CCTTCAACGG CAACAAGACC
GTCACGGCAG GCGGCGGCGG CGCCGTCGTC GGCAAAGCCG AACTCATCGA CCGCGTGCGC
CACCTCGTTA CCACGGCACG CGTGGGGTCG GACTACCTGC ACGACGCCGT CGGATTCAAC
TATCGCATCA CCAACATCCA GGCGGCGGTC GGCCTCGCCC AAATGGAGAG ACTCGATGCG
CTGGTAGAGC GCAAGCGCGA GATCAGGCGC CGCTACGACG ACGCCTTCGA GGGCGTGCCC
GGCCTGCGGC CTTTCCCGTC TCCCGAATGG GGGCGCAGCG CCGACTGGTT CTCGGGTGTG
GTCGTCGAGG GGATGACGGA GCCCGGGATG AAGCGCTTCG TGGCGGGCTT GCGGAAGCGC
CGGATCGATG CGCGCCCGTT CTGGATCCCG ATGCACCTGC AGCCGCCCCT GCAGCATCAC
CTTGCCGACG ACCTGACCTT CACCGAGGGG CTCTGGCACC AGGTGCTGAC GCTGCCCTGC
TCGACGTCGC TGACGCACGC CGACCAGGAC CACGTGGTCG CGGCGGTCCG GGCGCAGCTG
GCGGCCGGAT AG
|
|---|
| Protein sequence | MIPLAIPNLA GREAEYLQEC VATTFVSTVG PFVGRFEAAV AAAAGAEAAV STSAGTTAIH
AALVALGVER DDLVIVPALT FIATVSGIHW AGGRPWFAES APESWTLDPG RIETLLAREV
VMDGTGVARH RATGLRVKAM VPVYTLGNPP DMDRLVEVAR RYGLSILADA AAALGATYRG
RPLGEFGADL SIISFNGNKT VTAGGGGAVV GKAELIDRVR HLVTTARVGS DYLHDAVGFN
YRITNIQAAV GLAQMERLDA LVERKREIRR RYDDAFEGVP GLRPFPSPEW GRSADWFSGV
VVEGMTEPGM KRFVAGLRKR RIDARPFWIP MHLQPPLQHH LADDLTFTEG LWHQVLTLPC
STSLTHADQD HVVAAVRAQL AAG
|
|---|
| |