Gene Mchl_3979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3979 
Symbol 
ID7117178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4184792 
End bp4185874 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content63% 
IMG OID643526703 
ProductNucleotidyl transferase 
Protein accessionYP_002422712 
Protein GI218531896 
COG category[J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAGCGGG ATTGGCGTGA ACTGACGGCG AGGGCCGATT GGACACTGCG TGAAGTCATT 
ACCCTGATCG ACCGAGGCAA CCAGAAGCTG GCCATCGTCG TCGACGGCAG CGGCCACCTC
CTGGGAACGA TCAGCGACGG AGATATCCGA CGGGCCCTCC TGCGGGGCGA GACGTTGGAA
GCCTTGGCGG TGACGGTGAT GAACCATCGG CCGGCCATCG GATCGACGGT CGCGGCCCGA
AGCGACTTGG TGCAGCTCAT GCGCGCCAAG CGCATCAGCG CCGTCCCTAT CGTCGATGAG
GACATGCGCC TGATCGGCCT TGAATACCTG GAATCCGAGT CGGGGGGGCG ACGCCATGAC
AACCTCGTCG TGCTGATGGC TGGCGGCAAG GGCCAGCGCC TGCTGCCGCT CACGGAAAAG
TTGCCCAAGC CTCTGATCCA GGTGGCTGGA CGCCCTATCC TGGAGATCAT CATCCGGCGC
TTCGCTGCGC AGGGGTTCTG GCGGTTCGCC ATCTCGGTCA ATTTCCTCGG CCACATCATC
AAGGAGCATT TCGGGGACGG CTCTCAGCTC GGGGTCTCGA TCAGCTACAT TGAGGAGGGG
TCGAGTCTCG GCACGGCCGG ATCGCTGGGC CTGTTGACCG AGACGCCGGA TCGTGCCGTG
CTGGTCAGCA ACGGCGACCT CCTGACGAAA CTCAAATACG ACTGGATGCT CGATTTCCAC
CTGCAGCACG GAGCATCTGC GACGGTCGCG GTGCGCGAGT ACGATATGCA GGTCCCCTTC
GGAGTCGTCG GCACGCAGGA CGGCTTCGTC ACCCAGATCG ACGAGAAGCC GGTTCACCGC
TTCTTCATCA GCGCCGGCGT CTACATCCTC GAGCCGAGCG TCTTCGACCT CGTCGCGAAG
GATGAGCGGG TGGATATGCC TCAGGTGCTC CAGCGCCTGA TCAGCCGGCT GGACAAGGTC
GCGGCCTTTC CGTTGCGGGA GCGTTGGCTC GACATCGGTC GCCACGACGA CTTGGAGCGT
GCAGAGGCCG AGTTCGAAAT ATCAGAGCAA GATGAGCCAG AAGACCAGCT TCCCGTCGCT
TGA
 
Protein sequence
MKRDWRELTA RADWTLREVI TLIDRGNQKL AIVVDGSGHL LGTISDGDIR RALLRGETLE 
ALAVTVMNHR PAIGSTVAAR SDLVQLMRAK RISAVPIVDE DMRLIGLEYL ESESGGRRHD
NLVVLMAGGK GQRLLPLTEK LPKPLIQVAG RPILEIIIRR FAAQGFWRFA ISVNFLGHII
KEHFGDGSQL GVSISYIEEG SSLGTAGSLG LLTETPDRAV LVSNGDLLTK LKYDWMLDFH
LQHGASATVA VREYDMQVPF GVVGTQDGFV TQIDEKPVHR FFISAGVYIL EPSVFDLVAK
DERVDMPQVL QRLISRLDKV AAFPLRERWL DIGRHDDLER AEAEFEISEQ DEPEDQLPVA