Gene Mchl_3957 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3957 
Symbol 
ID7117155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4161248 
End bp4162507 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content70% 
IMG OID643526686 
ProductAcyl-CoA dehydrogenase type 2 domain 
Protein accessionYP_002422696 
Protein GI218531880 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0790683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.786977 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG CCGTCAATCC CACCACGGCC GAGGCCGGTA GCCGGCCGCA GGGCGTGCCG 
GGGCCCGCGC GCCCCGCGAC CCCGGCCCAC ATCATCCGCG ACGACGCCGA GGCGATCCGC
ATCGCCCACG AACTGGCGAA AGAATTCCGC GAGGGCGCCT CGGAGCGCGA CCGCACCAAT
GCCCGCCCGC TCGCCGAACT CGATGCCTTC TCCCAGAGCG GCCTGTGGTC GATCAACGTG
CCGCGGGCCT ATGGCGGGCC GGAGGTCTCC TACAAGACGC TGGCGCAGGT GATCGCGATC
ATCGCCGCCG CCGACCCCTC CATTGCGCAG ATCGCGCAGA ACCATCTCGG CATCGTCGCG
GCAATCCGCA CCGTCTCGGA CCCCGAGCAG CAGGCGCTTC TCTTCGGGCA AGTCCTGAAG
GGCACCCGCT TCGGCAACGC CTTCTCCGAG CGCGGCACCA AGCGCGCCGC CGAGTTCGAG
ACCCGCTTCA CCGATCACGG CGACCACGTC ATCGTGCGCG GCCAGAAGTT CTACTCGTCG
GGCGCGCTCC TCGCCCATCT CGTGCCGATC GTCGCCCTCG ATGCGGAGGG CCGCGCTTGG
TACGCCATCG CCGAGCGCGA TGCGCCGGGG CTCACCGTGA TCGACGACTG GTCGGCCTTC
GGCCAGCGGG GCACGGCCAG CGGCACCGTG ATCATCGAGG ATGTGCGGGT GGAAAAGAGC
CACCTCGTGC CGGGCTACCG CGCCTACGAG GCGCCGCGGG CGGATGGCGC CATCTTCCAG
ATCATCCAGG CCGCCGTCGA TGCCGGGATC GGCCGCGAGG CGCTCGACGA CACGATCGAC
TTCGTGCGCG AGAAGGCGCG CCCCTGGATC GACAGCGGCG GGGAGCGGGC CTCGGACGAC
CCCTACACCA TCCGCACCAT CGGCGACCTG ACGATCCGCC AGCACGCGGC GGAAGCCCTG
CTCGACCGGG CCGGACTGGC CATCGACGCC GCGCTGGCAA ACCCGACGGC CGAGAGCGTG
GCCGCGGCCC AGATCGCGGT CGCCGAGGCC AAGGTGCTGA CCACCGAGAC CGCGCTCGCG
GCTGCCAATA CCTTGTTCGA ACTCTCCGGC ACCCGCTCGA CCCTGGCCGA GCACAACCTC
GACCGCCACT GGCGCAACGC CCGCACCCAT ACCCTTCACG ATCCCGTGCG GTGGAAATAC
GCGATCATCG GCAACCACGC GCTGAACGGG GTGAACCCGC CGCTCCACGC CTGGAGTTGA
 
Protein sequence
MTIAVNPTTA EAGSRPQGVP GPARPATPAH IIRDDAEAIR IAHELAKEFR EGASERDRTN 
ARPLAELDAF SQSGLWSINV PRAYGGPEVS YKTLAQVIAI IAAADPSIAQ IAQNHLGIVA
AIRTVSDPEQ QALLFGQVLK GTRFGNAFSE RGTKRAAEFE TRFTDHGDHV IVRGQKFYSS
GALLAHLVPI VALDAEGRAW YAIAERDAPG LTVIDDWSAF GQRGTASGTV IIEDVRVEKS
HLVPGYRAYE APRADGAIFQ IIQAAVDAGI GREALDDTID FVREKARPWI DSGGERASDD
PYTIRTIGDL TIRQHAAEAL LDRAGLAIDA ALANPTAESV AAAQIAVAEA KVLTTETALA
AANTLFELSG TRSTLAEHNL DRHWRNARTH TLHDPVRWKY AIIGNHALNG VNPPLHAWS