| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_3894 |
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| Symbol | sdhA |
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| ID | 7114903 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | + |
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| Start bp | 4088064 |
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| End bp | 4089881 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643526624 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_002422634 |
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| Protein GI | 218531818 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.197251 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTCCA ACGGAACGAA CGGCGGCGCG CCCGCCTACG CCATCACCGA CCACACCTTC
GACGTGGTGA TCGTCGGCGC CGGCGGCGCG GGTCTGCGCG CCACGGTCGG CTGCTCCCAG
GCCGGGCTTC GCACCGCCTG CATCACCAAA GTCTTCCCGA CCCGCTCGCA CACCGTGGCG
GCGCAGGGCG GCATCTCCGC CTCGCTCGGC AATATGGGGC CGGACGATTG GCGCTGGCAC
ATGTACGACA CCGTGAAGGG CTCGGACTGG CTCGGCGACC AGGACGCGAT CGAGTACCTC
GTTCGCAACG CGCCCGCCGC CGTCTACGAA CTCGAGCACT GGGGCGTGCC GTTCTCCCGC
ACGGACGAGG GCAAGATCTA CCAGCGCCCG TTCGGCGGCA TGACCACCGA TTACGGCAAG
GGCACCGCCC AGCGCACCTG CGCCGCGGCC GACCGCACCG GCCACGCCAT GCTCCACACG
CTCTACGGGC AGGCGGTGAA GAACAAGACC CAGTTCTTCA TTGAGTACTT CGCCCTCGAC
CTGATCATGG ACGAGGACGG CCGCTGCCGC GGCGTGATGG CGATCGATCA GGCCACCGGC
GAGATCCACC GCTTCCGCGC CCAGCAGACC ATCCTCGCCA CCGGCGGCTA CGGCCGCGCC
TACTTCTCGG CGACCTCGGC GCATACCTGC ACCGGTGACG GCAACGCCAT GGTGCTGCGC
GCCGGCCTGC CGCTGCAGGA CATGGAGTTC GTGCAGTTCC ACCCCACCGG CATCTACGGC
GCCGGCTGCC TCATCACGGA AGGCGCGCGC GGCGAGGGCG GCTACCTCAC CAACTCCGAG
GGCGAGCGCT TCATGGAGCG CTACGCCCCC TCGGCCAAGG ACCTCGCCTC CCGCGACGTG
GTCTCCCGCT CCATGACCAT GGAGATCCGC GACGGCCGCG GCGTGGGCAA GGAAGGCGAC
CACATCTTCC TGCATCTCGA CCATCTCGAC CCGAAGATCC TGCACGAGCG CCTGCCCGGC
ATCTCGGAGA GCGCAAAGAT CTTCGCGGGC GTGGACGTGA CCAAGGAGCC GATCCCGGTC
CTGCCGACGG TCCACTACAA CATGGGCGGC ATCCCGACGA ACTTCCACGG CGAGGTGCTG
ACCCTGAAGA ACGGCAACCC CGACACGGTG GTGCCGGGCC TGATGGCGCT CGGCGAGGCG
GCCTGCGTCT CGGTGCACGG CGCTAACCGC CTCGGCTCGA ATTCGCTGAT CGACCTCGTG
GTGTTCGGCC GCGCCGCGGG CCTGCGTTGC GCCGACATCG TCGAGCCCGA CGCCCGCCAG
CCGGAACTGC CGAAGGGCTC GGCCGACAAG GCGCTCGCGC GCCTCGACCG CTTCCGCTAC
GCCGACGGCG GCACTCCGAC CGCGCAGCTG CGCGACCGGA TGCAGCGGAC GATGCAGAAC
AACTGCGCCG TCTTCCGCAC CGGCGAGGTG CTGGAGGAGG GCAAGGGCCT GATTCACGAG
GTCTGGCGCG GCGTCTCCGA CATCGCCATC ACCGACCGTT CGCTGGTGTG GAACACCGAC
CTGCTCGAGA CCCTGGAATT CGACAACCTG ATCGGTCAGG CGGTCGTGAC CATGGAATCG
GCGGTCAACC GCAAGGAAAG CCGCGGCGCG CATGCCCGCG AGGACTTCCC CGACCGCGAC
GACAAGGAGT GGATGAAGCA CACGCTCGCG TGGCTCGACC AATCCAAGCA CGGCGTCGAG
ATCGATTACC GTCCGGTCCA CACCTACACG ATGTCGAACG ACATTCAGTA CATCGAGCCG
AAGGCGCGGG TGTACTGA
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| Protein sequence | MASNGTNGGA PAYAITDHTF DVVIVGAGGA GLRATVGCSQ AGLRTACITK VFPTRSHTVA
AQGGISASLG NMGPDDWRWH MYDTVKGSDW LGDQDAIEYL VRNAPAAVYE LEHWGVPFSR
TDEGKIYQRP FGGMTTDYGK GTAQRTCAAA DRTGHAMLHT LYGQAVKNKT QFFIEYFALD
LIMDEDGRCR GVMAIDQATG EIHRFRAQQT ILATGGYGRA YFSATSAHTC TGDGNAMVLR
AGLPLQDMEF VQFHPTGIYG AGCLITEGAR GEGGYLTNSE GERFMERYAP SAKDLASRDV
VSRSMTMEIR DGRGVGKEGD HIFLHLDHLD PKILHERLPG ISESAKIFAG VDVTKEPIPV
LPTVHYNMGG IPTNFHGEVL TLKNGNPDTV VPGLMALGEA ACVSVHGANR LGSNSLIDLV
VFGRAAGLRC ADIVEPDARQ PELPKGSADK ALARLDRFRY ADGGTPTAQL RDRMQRTMQN
NCAVFRTGEV LEEGKGLIHE VWRGVSDIAI TDRSLVWNTD LLETLEFDNL IGQAVVTMES
AVNRKESRGA HAREDFPDRD DKEWMKHTLA WLDQSKHGVE IDYRPVHTYT MSNDIQYIEP
KARVY
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