Gene Mchl_3788 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3788 
Symbol 
ID7116983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp4002302 
End bp4003051 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content67% 
IMG OID643526524 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_002422535 
Protein GI218531719 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.371562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGTCT TAGCGGGCAG TGGAACGGCG GTGAGCGGCC CCTTGCTGCG CAAGCTGCAA 
GGATTCAGCA AGCTGGAAGA AGCGGACGCG GCCGCCCTGG CGATCATCGA GGCGGGGACA
CGGCTGATTC CGGCCGGCAC GGACCTGATC TCCGAGGGTG ACCGGCCCGA GGGCATGATC
GCGATCACGG AAGGCTTCGC CTGCCGCTAC AAGCTGCGGG CGAACGGTGC GCGTCAGATC
ACGGCCTACC TCATCCCGGG GGATATCTGC GACTTCGAGA CCTCGATCCT GAACCGGATC
GATCACACCA TCGGCACGCT CTCCACCTGC CGCGTCGCGC GGATCGGGCC CGAGGCCGGG
CGGGAATTGC GTCAACGTCC CGCTCTCGCC CGCGGCCTGC GCACGGTGGC CCTGGTCGAT
GAGGCGACCC TCCGCGAGTG GATGATGAAT ATCGGCCGCC GCTCGGCCGT GGAGCGCCTC
GCGCACCTGT TGTGCGAATT GCTCGTACGC CTGCGGGCGG TGGGGCTGGC GAGCGGCAAC
AGCTTCGACC TACCGATCAC GCAAATTGAC CTCGCCGACA CCACCGGCAT GACCAGCGTG
CACGTGAACC GCTCGCTCGG CGAACTCAAG CGTGCAGGGC TGATCGAGCG CAAGGGCAAG
CGCGTGACGC TCTGCGACCT GCCTCGCCTC GTCGAGTTGG CCGAGTTCCG GTCGAATTAC
CTGAATTGGG AAGCACAAAC CGCCGCCTAG
 
Protein sequence
MKVLAGSGTA VSGPLLRKLQ GFSKLEEADA AALAIIEAGT RLIPAGTDLI SEGDRPEGMI 
AITEGFACRY KLRANGARQI TAYLIPGDIC DFETSILNRI DHTIGTLSTC RVARIGPEAG
RELRQRPALA RGLRTVALVD EATLREWMMN IGRRSAVERL AHLLCELLVR LRAVGLASGN
SFDLPITQID LADTTGMTSV HVNRSLGELK RAGLIERKGK RVTLCDLPRL VELAEFRSNY
LNWEAQTAA