Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_3642 |
Symbol | |
ID | 7115631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 3837103 |
End bp | 3837777 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643526378 |
Product | ThiJ/PfpI domain protein |
Protein accession | YP_002422390 |
Protein GI | 218531574 |
COG category | [K] Transcription |
COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.667474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGATCG AGATCGGATT CCTCGTCTTC CCCAAGGTGC AGCAGCTCGA TCTGACCGGC CCCTACGAGG TGCTGGCCAT GGTGCCGGGC GCCCGCGTCC ATCTCGTCGC GAAGGCGCTG GATCCGGTCA CGAGCGCCAC CGGCCTCGTG CTGACGCCCA CAATCACCTT CGCCGAATGC CCGGCTCTCG ACGTGATCTG CGTGCCCGGC GGCGCGGGGG TGAACCCGCT GATGGAGGAT GCCGAGACCC TCGACTTCCT GCGCCGTCAG GCGGAGCGCG CCCGCTATGT CACCTCCGTC TGCACCGGGG CCCTGGTGCT CGGCGCGGCG GGACTTCTGC GGGGCAAGCG GGCCACCACG CACTGGGCGG CGCACGATCT CCTCGCCGCC TTCGGGGCGA TCCCGACCGA GGGGCGCGTG GTGCGCGACG GCAACCTGAT CACCGGTGGC GGCGTGACCG CAGGCATCGA TTTCGGCCTG ACGCTCGCGG CCGAACTCAC CGACGTGGCG ACCGCGAAGG CGATCCAGCT CCATCAGGAA TACGCTCCGG CCCCGCCCTT CGATGCCGGC CGCCCCGAAA CCGCGGGTCC AGAGATTCTC GCGGCCGCCC GCGAGCGGCT GTCGGTGACG CGCCGGGAAC GGGAGGTCAT CGTGGCGCGG GTGACGCGGG GTTAA
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Protein sequence | MTIEIGFLVF PKVQQLDLTG PYEVLAMVPG ARVHLVAKAL DPVTSATGLV LTPTITFAEC PALDVICVPG GAGVNPLMED AETLDFLRRQ AERARYVTSV CTGALVLGAA GLLRGKRATT HWAAHDLLAA FGAIPTEGRV VRDGNLITGG GVTAGIDFGL TLAAELTDVA TAKAIQLHQE YAPAPPFDAG RPETAGPEIL AAARERLSVT RREREVIVAR VTRG
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