Gene Mchl_3560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3560 
Symbol 
ID7113693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3746738 
End bp3747796 
Gene Length1059 bp 
Protein Length352 aa 
Translation table11 
GC content70% 
IMG OID643526296 
Productputative mRNA 3-end processing factor 
Protein accessionYP_002422308 
Protein GI218531492 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.146642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.26456 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCAAC GCGCCTCCGA TCTCCTCACC CTGACCCGCG AGGGCCTCTA TTGTCCGCTC 
GGGCGCTTCC ACGTCGATCC GACGCGGCCG GTCGAGCGGG CGCTGATCAC CCACGGCCAT
GCCGACCACG CCCGCGCCGG CCACGGCACG GTGCTGGCCA CGCCCGAGAC CCTGCGGATC
ATGGCCGTGC GCTACGGCGA GGATTTCTGC ACGAGCCGCC AGGAGGCGCG GCTGGCTGAA
CGGATGCGGA TCGGCGACGT CACCGTGTTC TTCGCCCCCG CAGGCCATGT GCTCGGATCG
GCGCAGATCG CGATCGAGCG GGACGGCAAA CGCATCGTCG TCTCCGGCGA CTACAAGCGC
GCGCCCGATC CGACCTGCCT GCCGTTCGAA GTGGTGCCCT GCGACGTGTT CATCACCGAG
GCCACCTTCG GGCTACCAGT CTTCCGCCAT CCCGACACGC GGGGCGAGGT GCGCAAGCTG
ATCGATTCGG TGACGCTGTT TCCCGAGCGC GCCCACATCG TCGGCGCCTA CGCGCTCGGC
AAGGCGCAGC GGGTGATGGC GCTGCTGCGC GAGGAGGGCT GGGACCGGCC GATCCATCTG
CACGGGGCGA TGGAGAAGCT GACCGAACTC TACAAGCGGG AAGGCGTGCC GCTCGGCGAG
ACGCCGAAGG TGGTGGCCGC GGACCGGAAG TCCCTGCACG GCGCCATCGT GCTCTGCCCG
CCCTCCTCGA TACAGGACGT ATGGTCGCGA AAATTCCCGG ATCCGGTCAC CGCCTTCGCC
TCGGGCTGGA TGCGGGTGCG CGCCCGCGCC CGCCAGAAGG GCGTCGAGCT GCCGCTCGTC
ATTTCCGACC ATTCCGACTG GCCGGACCTG TGCCGGACGA TCCTCGAAAC GGGCGCCGAG
GAGGTCTGGG TCACGCATGG CCAGGAGGAC GCGCTGGTGC ATTGGTGCGG CACGCGCGGC
ATCCGCGCCA AGCCGCTGCA CCTCTTAGGG TATGGCGACG ACGGCGAGGC CGAGCCCGAT
CCGGGACACG ACCCGCGGAT GGAGGAGGCC TCGGCGTGA
 
Protein sequence
MSQRASDLLT LTREGLYCPL GRFHVDPTRP VERALITHGH ADHARAGHGT VLATPETLRI 
MAVRYGEDFC TSRQEARLAE RMRIGDVTVF FAPAGHVLGS AQIAIERDGK RIVVSGDYKR
APDPTCLPFE VVPCDVFITE ATFGLPVFRH PDTRGEVRKL IDSVTLFPER AHIVGAYALG
KAQRVMALLR EEGWDRPIHL HGAMEKLTEL YKREGVPLGE TPKVVAADRK SLHGAIVLCP
PSSIQDVWSR KFPDPVTAFA SGWMRVRARA RQKGVELPLV ISDHSDWPDL CRTILETGAE
EVWVTHGQED ALVHWCGTRG IRAKPLHLLG YGDDGEAEPD PGHDPRMEEA SA