Gene Mchl_3459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3459 
Symbol 
ID7114217 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3645160 
End bp3647436 
Gene Length2277 bp 
Protein Length758 aa 
Translation table11 
GC content66% 
IMG OID643526195 
Productglycogen debranching enzyme GlgX 
Protein accessionYP_002422207 
Protein GI218531391 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases 
TIGRFAM ID[TIGR02100] glycogen debranching enzyme GlgX 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0095234 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATA CCGACAGGAC TGCGACGCCG AGGCCGCGCA CATCGCGCAC GCGTATCCGC 
GAAGGCTCGC CGCATCCCCG CGGTGCCACC TGGGACGGCC GCGGCGTAAA CTTCGCGCTG
TTCTCGGCCC ATGCCACGAA GGTCGAGCTG TGCCTGTTCG ACGATGCCGG CGAGAACGAA
ATCGAGCGCA TCGATCTGCC CGAGTACACC GACGAGGTCT GGCACGGCTA TCTGCCGGAT
GCGCGCCCCG GCACGATCTA CGGCTACCGC GTCCACGGCC CCTACGAGCC CGAAGCCGGC
CACCGCTTCA ATCCGAACAA GCTCCTCATC GACCCCTACG CCAAGGGCTT GGTCGGCACG
ATCCAGTGGA ACCCCGCCCT GTTCGGCTAC AAGATGGAGA CGGGCGACGA CCTCACCTTC
GATGAGCGCG ATTCCGCGCC CTATACCCGC CGCTCGCGCG TGATCGACCC GGCCTTCACC
TGGGGCCGGG ATGTGAAGCC GCGCGTGCCG TGGGAGCGCA CGATCATCTA CGAGACCCAC
GTGAAGGGGT TCACTAAGCT GCACCCGGCT GTGCCGGAGA AGCTGCGCGG CACCTATGCC
GGCCTCGGTA ACCCGGCGGT GCTCGACTAC ATCAAGAGCC TCGGCGTCAC CTCGGTCGAG
CTGCTGCCGG TCCACTCCTT CGTGCAGGAC GACTACCTGC AGCAGAAGGA TCTCATCAAT
TACTGGGGCT ACAACACCAT CTCGTTCTTC ACGCCCGCCC GGCGCTACGC GGCGGTGCCG
GACTTCGCCT TCTCCGAGTT CAAGGAGATG GTCGCGCGCA TGCACGGCGC CGGCCTCGAG
GTGATCCTCG ACGTGGTCTA CAACCACACG GCCGAGGGCA ACGAGAAGGG CCCGACCCTC
TCGTTCAAGG GCGTCGACAA CGCCTCCTAC TACCGCCTGC TGCCGAACCA GCCGCGCTAC
TACATCAACG ACACCGGCAC CGGGAACACC TTCAACCTCT CGCATCCCCG CGTGCTGCAG
CTCGTCACCG ACTCGCTCCG CTACTGGGCG ACCGAGATGC GGGTAGACGG CTTCCGCTTC
GATCTGGCGA CGATTCTCGG CCGCGAGCCC TACGGCTTCG ACGAGGGAGG CGGCTTCCTC
GACACCTGCC GCCAGGACCC CGTCCTCAAC GACGTGAAGC TCATCGCCGA GCCGTGGGAT
TGCGGCCCCG GCGGCTATCA GGTCGGCGGC TTCCCGCCGG GCTGGGCCGA GTGGAACGAC
CGGTTCCGCG ACGACGTGCG CGGCTACTGG AAGGGCGATG CCGGGCTGCT GCCGGGGCTC
GCCTCGCGCA TCACCGCCTC GGCCGACAAG TTCAACAAGC GCGGTCGCCG GCCCTGGGCC
TCGGTCAACT TCATCACCGC GCATGACGGC TTCACGCTGA ACGACACGGT TTCGTACAAC
GAGAAGCACA ACGAGGCGAA CGAAGAGGGC AACCGCGACG GGCACGGCCA CAACCTCTCC
TACAATTACG GCGTCGAGGG CCCGACCGAC GATCCCGAGA TCCGCTCGGT GCGTTTGCGC
CAGATGCGCA ACATGCTGGC GACACTGTTC CTGTCGAAGG GCACACCGAT GCTGCTCGCC
GGCGACGAGT TCGCCCGCAC GCAGAAGGGC AACAACAATG CCTATTGCCA GGATAACGAA
GTCAGTTGGG TCGATTGGGG TGCGATCGGC GAGGAGGAGC GGGATCTGGC CGAGTTCACG
CAGCGCCTGA TCCTGCTGCG CAACGCCCTG CCGATGCTCT CGCGCGGACG CTTCGTCACG
GGAGCCTACG ACGAGGAGTT CGGCGTCAAG GACGTGACCT GGCTCACGCC CACCGGCACC
GAGATGAGCC CGGAGAACTG GAACGACGGC AACTCGCGCA CCCTCGCCGT GCTGCTCGAC
GGGCGCGCCC AGGCGAGCGG CATCCACAAG CGCGGCGGCG ATGCCACCCT GCTGTTGTTC
TACAACGCCT ATCACGACGT GGTGGACTTC ACCCTCCCCG AGGCGCCGGG CGGCACCTCC
TGGACGCGGC TGCTCGATAC CAACCTGCCC GACAGCCAGG AGGTGGAGAG CTTCGCCGTC
GGCGAGAGCT ACTCGGTCAC GGGGCGCTCG ATGCTGATGT TCGTCCTCAA GCCCGTCGAG
AACGAGGACG AGGACGAGGA GCACAGCGAC ATGGAGCGCT CCTACCAGTA CGTGATGCAG
GCCTTCGAGC GGGCGAATGT CGAGAGCGTG AGCTTCGGCA TCGACGAGGA GGCCTGA
 
Protein sequence
MADTDRTATP RPRTSRTRIR EGSPHPRGAT WDGRGVNFAL FSAHATKVEL CLFDDAGENE 
IERIDLPEYT DEVWHGYLPD ARPGTIYGYR VHGPYEPEAG HRFNPNKLLI DPYAKGLVGT
IQWNPALFGY KMETGDDLTF DERDSAPYTR RSRVIDPAFT WGRDVKPRVP WERTIIYETH
VKGFTKLHPA VPEKLRGTYA GLGNPAVLDY IKSLGVTSVE LLPVHSFVQD DYLQQKDLIN
YWGYNTISFF TPARRYAAVP DFAFSEFKEM VARMHGAGLE VILDVVYNHT AEGNEKGPTL
SFKGVDNASY YRLLPNQPRY YINDTGTGNT FNLSHPRVLQ LVTDSLRYWA TEMRVDGFRF
DLATILGREP YGFDEGGGFL DTCRQDPVLN DVKLIAEPWD CGPGGYQVGG FPPGWAEWND
RFRDDVRGYW KGDAGLLPGL ASRITASADK FNKRGRRPWA SVNFITAHDG FTLNDTVSYN
EKHNEANEEG NRDGHGHNLS YNYGVEGPTD DPEIRSVRLR QMRNMLATLF LSKGTPMLLA
GDEFARTQKG NNNAYCQDNE VSWVDWGAIG EEERDLAEFT QRLILLRNAL PMLSRGRFVT
GAYDEEFGVK DVTWLTPTGT EMSPENWNDG NSRTLAVLLD GRAQASGIHK RGGDATLLLF
YNAYHDVVDF TLPEAPGGTS WTRLLDTNLP DSQEVESFAV GESYSVTGRS MLMFVLKPVE
NEDEDEEHSD MERSYQYVMQ AFERANVESV SFGIDEEA