Gene Mchl_3427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3427 
Symbol 
ID7116074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3612987 
End bp3614009 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content70% 
IMG OID643526162 
ProductPolyprenyl synthetase 
Protein accessionYP_002422175 
Protein GI218531359 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0142] Geranylgeranyl pyrophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.640132 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGCGTCG TCGTTACCCT CGATGAAGGC CGCTCCGATC CGGAGGCCAG CCTCACCGAT 
CTCGTGAGCC TCGTCGCGGC CGGGATGGAG CGGGTGAACG CGACCATTCT GTCGCGCACG
GGCTCCGACG TGGCGATGAT CCCCGAGGTC GCCAACCACC TGATCGCGTC GGGCGGCAAG
CGCCTGCGTC CGATCCTGAC GCTCGCCTGC GCCGATCTCT GTGATTACGG TAGCGGCGAC
GGCGCGGTGA AGCTCGCTGC CGCGGTCGAG TTCATGCACA CCGCGACCCT CCTCCACGAC
GACGTGGTGG ACGAGAGCGA CATGCGCCGC GGGCGCGTCG CCGCCCGCAT CAAGTGGGGC
AACGAGGCGA GCGTGCTCGT CGGCGACTTC CTGCTCGGCC AAGCCTTCCG CATGATGGTC
GAGGTCGGGA GCCTGCGCGC CCTCGACATC CTGTCCGCCG CGGCCACCGT GATCGCCGAG
GGCGAGGTGA TGCAGCTCAC CGCCGCCAAG AACATCGAGA CGAGCGAGAA CGAGTACCTC
GCCGTGATCC GCGGCAAGAC CGCGGAGCTG TTCGCGGCGG CCTGCGAAGT CGGCCCGGTC
CTGGCCGGGC GGCCGGAATC CGAGCAGGCG GCCTGCCGCG CCTACGGCAT GAATCTCGGC
ATCGCCTTCC AGCTCATCGA CGACGTGCTC GATTACGGCG GCACCAGCGC GGCGCTCGGC
AAGAATGTCG GCGACGATTT CCGCGAGGGC AAGATCACCC TGCCGATCGT GCTGGCGCTG
CGCCGCGGCT CGGACGAGGA GCGCGCCTTC TGGCGCCGCA CCCTCGAACG CGAGGATCGG
GCGGAGGGCG ATCTTCAGCA GGCGCTCGCC ATCCTCAGCC GCCATCGCGC CCTGGACGAC
ACGATCGAGC GGGCGCACCA CTACGGCGAT CAGGCTCGCG CGGCGCTTGA GCCGTTCCCG
CAGGGGCCGA TGAAGGCCGC CCTGCTGCAG GTGGTCGATT TCTGCATCGC CCGGGCGCAC
TGA
 
Protein sequence
MGVVVTLDEG RSDPEASLTD LVSLVAAGME RVNATILSRT GSDVAMIPEV ANHLIASGGK 
RLRPILTLAC ADLCDYGSGD GAVKLAAAVE FMHTATLLHD DVVDESDMRR GRVAARIKWG
NEASVLVGDF LLGQAFRMMV EVGSLRALDI LSAAATVIAE GEVMQLTAAK NIETSENEYL
AVIRGKTAEL FAAACEVGPV LAGRPESEQA ACRAYGMNLG IAFQLIDDVL DYGGTSAALG
KNVGDDFREG KITLPIVLAL RRGSDEERAF WRRTLEREDR AEGDLQQALA ILSRHRALDD
TIERAHHYGD QARAALEPFP QGPMKAALLQ VVDFCIARAH