Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_3296 |
Symbol | |
ID | 7117063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 3475639 |
End bp | 3476790 |
Gene Length | 1152 bp |
Protein Length | 383 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643526046 |
Product | queuine tRNA-ribosyltransferase |
Protein accession | YP_002422061 |
Protein GI | 218531245 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming [TIGR00449] tRNA-guanine transglycosylases, various specificities |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.300958 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGAAC CGCTCGATCC CCCGACCGAC TTCTCCTTCA CGGTCTCCGC CACCGATGGA CAGGCCCGCA CCGGCCACAT CGCCATGCCG CGCGGAAAGA TCCGCACGCC GGCCTTCATG CCGGTGGGCA CGGCCGCGAC CGTGAAGGCG ATGTATCCGG AGCAGGTGCG CGATCTGGGC GCCGACGTGG TTCTCGGCAA CACCTACCAC CTGATGCTGC GCCCCGGCGC CGAACGGATG GCGCGGCTCG GCGGGCTCCA CCGCTTCATG CGCTGGGACG GCCCGATCCT CACCGATTCC GGCGGCTTCC AGGTGATGTC GCTCTCGGCC CTGCGAAAGA TCGACGAGGA GGGCGTCACC TTCCGTTCGC ATATCGACGG CACCGCTCAC CGGATGAGCC CGGAGCGCTC CATCGAGATC CAGGGCCTGC TCGGCTCCGA CATCCAGATG CAGCTCGACG AATGCGTGCG CCTGCCGGCC GAGCGGCCGG AGATCGAGAA GGCGATGCAC CTGTCCCTGC GCTGGGCCGA GCGCTGCCGC GTCGCCTTCG GCGAGCAATC GGGCAAGGCG ATGTTCGGCA TCGTCCAGGG CGGCGACGTG CCCGAATTGC GCGTCGAGAG CGCGCGGGCG CTGACCGATC TCGGCCTCAA GGGCTACGCC ATCGGCGGGC TTGCCGTCGG CGAGCCGCAG GCGGTGATGC TGGCGATGAT CGAGACGGTG GAGCCGCATC TGCCGGCCGG CAAGCCGCGC TACCTCATGG GCGTCGGCAC CCCCGACGAC CTGATGCAGT CGGTGATGCG CGGCATCGAC ATGTTCGATT GCGTGATGCC GACCCGCGCC GGCCGCCACG GCCTCGCCTA TACGAGGCAC GGCCGGATCA ACCTGCGCAA CGCCCGCCAC GCCGAGGACA CGCGGCCGCT GGACGAGGCC TCGGACTGCC CGGCGGCGCG GGACTATTCG CGCGCCTATC TCCACCACCT CGTCCGGTCC GACGAGATCC TGGGGATGAT GCTGCTGACC TGGAACAACC TCGCCTACTA TCAGGCGCTG ATGGCCGGCA TGCGCGCGGC GATCGCGGCC GGGCGGCTCG CGGATTTCGT GGCCGAGACC AAGGACGGCT GGGCGCGGGC CGAGGCCGCC GCGAAGGGCT GA
|
Protein sequence | MTEPLDPPTD FSFTVSATDG QARTGHIAMP RGKIRTPAFM PVGTAATVKA MYPEQVRDLG ADVVLGNTYH LMLRPGAERM ARLGGLHRFM RWDGPILTDS GGFQVMSLSA LRKIDEEGVT FRSHIDGTAH RMSPERSIEI QGLLGSDIQM QLDECVRLPA ERPEIEKAMH LSLRWAERCR VAFGEQSGKA MFGIVQGGDV PELRVESARA LTDLGLKGYA IGGLAVGEPQ AVMLAMIETV EPHLPAGKPR YLMGVGTPDD LMQSVMRGID MFDCVMPTRA GRHGLAYTRH GRINLRNARH AEDTRPLDEA SDCPAARDYS RAYLHHLVRS DEILGMMLLT WNNLAYYQAL MAGMRAAIAA GRLADFVAET KDGWARAEAA AKG
|
| |