Gene Mchl_3296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3296 
Symbol 
ID7117063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3475639 
End bp3476790 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content70% 
IMG OID643526046 
Productqueuine tRNA-ribosyltransferase 
Protein accessionYP_002422061 
Protein GI218531245 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0343] Queuine/archaeosine tRNA-ribosyltransferase 
TIGRFAM ID[TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.300958 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGAAC CGCTCGATCC CCCGACCGAC TTCTCCTTCA CGGTCTCCGC CACCGATGGA 
CAGGCCCGCA CCGGCCACAT CGCCATGCCG CGCGGAAAGA TCCGCACGCC GGCCTTCATG
CCGGTGGGCA CGGCCGCGAC CGTGAAGGCG ATGTATCCGG AGCAGGTGCG CGATCTGGGC
GCCGACGTGG TTCTCGGCAA CACCTACCAC CTGATGCTGC GCCCCGGCGC CGAACGGATG
GCGCGGCTCG GCGGGCTCCA CCGCTTCATG CGCTGGGACG GCCCGATCCT CACCGATTCC
GGCGGCTTCC AGGTGATGTC GCTCTCGGCC CTGCGAAAGA TCGACGAGGA GGGCGTCACC
TTCCGTTCGC ATATCGACGG CACCGCTCAC CGGATGAGCC CGGAGCGCTC CATCGAGATC
CAGGGCCTGC TCGGCTCCGA CATCCAGATG CAGCTCGACG AATGCGTGCG CCTGCCGGCC
GAGCGGCCGG AGATCGAGAA GGCGATGCAC CTGTCCCTGC GCTGGGCCGA GCGCTGCCGC
GTCGCCTTCG GCGAGCAATC GGGCAAGGCG ATGTTCGGCA TCGTCCAGGG CGGCGACGTG
CCCGAATTGC GCGTCGAGAG CGCGCGGGCG CTGACCGATC TCGGCCTCAA GGGCTACGCC
ATCGGCGGGC TTGCCGTCGG CGAGCCGCAG GCGGTGATGC TGGCGATGAT CGAGACGGTG
GAGCCGCATC TGCCGGCCGG CAAGCCGCGC TACCTCATGG GCGTCGGCAC CCCCGACGAC
CTGATGCAGT CGGTGATGCG CGGCATCGAC ATGTTCGATT GCGTGATGCC GACCCGCGCC
GGCCGCCACG GCCTCGCCTA TACGAGGCAC GGCCGGATCA ACCTGCGCAA CGCCCGCCAC
GCCGAGGACA CGCGGCCGCT GGACGAGGCC TCGGACTGCC CGGCGGCGCG GGACTATTCG
CGCGCCTATC TCCACCACCT CGTCCGGTCC GACGAGATCC TGGGGATGAT GCTGCTGACC
TGGAACAACC TCGCCTACTA TCAGGCGCTG ATGGCCGGCA TGCGCGCGGC GATCGCGGCC
GGGCGGCTCG CGGATTTCGT GGCCGAGACC AAGGACGGCT GGGCGCGGGC CGAGGCCGCC
GCGAAGGGCT GA
 
Protein sequence
MTEPLDPPTD FSFTVSATDG QARTGHIAMP RGKIRTPAFM PVGTAATVKA MYPEQVRDLG 
ADVVLGNTYH LMLRPGAERM ARLGGLHRFM RWDGPILTDS GGFQVMSLSA LRKIDEEGVT
FRSHIDGTAH RMSPERSIEI QGLLGSDIQM QLDECVRLPA ERPEIEKAMH LSLRWAERCR
VAFGEQSGKA MFGIVQGGDV PELRVESARA LTDLGLKGYA IGGLAVGEPQ AVMLAMIETV
EPHLPAGKPR YLMGVGTPDD LMQSVMRGID MFDCVMPTRA GRHGLAYTRH GRINLRNARH
AEDTRPLDEA SDCPAARDYS RAYLHHLVRS DEILGMMLLT WNNLAYYQAL MAGMRAAIAA
GRLADFVAET KDGWARAEAA AKG