Gene Mchl_3279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3279 
Symbol 
ID7117046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3455574 
End bp3456815 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content73% 
IMG OID643526029 
Productlytic murein transglycosylase 
Protein accessionYP_002422044 
Protein GI218531228 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID[TIGR02283] lytic murein transglycosylase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.991349 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGCCCT CTGCCAAAGC GCTCCTTCTC GCCACCGCGA TCCTCGCCGG GCCGATTCCG 
GCGCGGGCCG AGACACCGAC CGACCCGGCG CCGGCGGATT TCGCGCACTG CCTCGGTGCC
TTGAAGACGC TCGCCGAGGA GCGCGGCGTG CCGCGGACGG TGGCCGAGAC GGCCCTGTCG
GGGATCGCGC CCGATCCGTC GGTGGTGCCG GCGACCCAAT CGCAGGCCGA GTTCGTCAAG
CCGGTCTGGG AGTATATCGA GGCGAGCGTT ACGCCGGAGC GGATCGCGAC GGGCCAAGCC
AAGCTCGCCC AGTGGTCCGA GGTGCTGGGG CGGATCGAGG CGGCCTACGG CGTCGATCGG
CACATTTTGG TCGCCTTCTG GGGCGTCGAG TCGAATTACG GGGCCGCCCT CGAAGGCGCC
GGCATCCGAC CCGTCGTGCC GGCGCTGGCG ACGCTGGCCT GCGGCGATCC CGCCCGGCCC
GGCCTGTGGC GCGAGGAACT CGTCGCGGCC TTGAAGATCC TCGCCGACGG CGATGCCGAC
GCGGAACGGA TGCGCGGGTC CTGGGCCGGC GCCATGGGCC ACACCCAGTT CATGCCGACC
GCCTTCCTGC GTCACGCGGT CGATTTCGGC GGCGACGGCC GGCGCGACAT CTGGCACTCG
GTGCCCGACG CGCTCGCCTC GACCGCCAAC TTCCTGAAGC AGTCCGGCTG GCGCGCGGGC
GAGGGCTGGG GCCTCGAGGT GCTGCTGCCG GACGGGTTCG ATTACCGGGT CGCCGACGAG
ACCACCGAGC GGCCCTTCGC CGAATGGCAA AGGCTGGGCC TCAAGCCGGC CAACGGCGCC
TTTCCTGATG GTGCGGAGCG CCGCGCCGCC CTGCTGCTGC CGACGGGCGC GAAGGGGCCG
GCCTTCCTGC TGGAACCGAA CTTCCGGGTG ATCCTGCGCT ACAACACGGC GCTCGCCTAC
GCGCTGACCG TGGCGCATCT CTCCGACCGG CTGCGCGGCG CACCCGGCTT CTCCCGCGAC
TGGCCGCGGA CCGACCGCAT GCTCACGACG GAGGAGCGCA CCGACCTGCA GACTCGGCTC
GCCGCCCTCG GCTATCCGGT CGGCGGCGCC GACGGCAAGA TCGGCCCGAA GACCCGTGCC
GCGATCCGCG CCTTCCAGGA AGCCAAGGGC CTCGTCCCCG ACGGCTATGC CGATGCCGCC
CTGCTCGATC GGGTGCGGGC GGCGAACGCG CCGGCCCCGT AG
 
Protein sequence
MQPSAKALLL ATAILAGPIP ARAETPTDPA PADFAHCLGA LKTLAEERGV PRTVAETALS 
GIAPDPSVVP ATQSQAEFVK PVWEYIEASV TPERIATGQA KLAQWSEVLG RIEAAYGVDR
HILVAFWGVE SNYGAALEGA GIRPVVPALA TLACGDPARP GLWREELVAA LKILADGDAD
AERMRGSWAG AMGHTQFMPT AFLRHAVDFG GDGRRDIWHS VPDALASTAN FLKQSGWRAG
EGWGLEVLLP DGFDYRVADE TTERPFAEWQ RLGLKPANGA FPDGAERRAA LLLPTGAKGP
AFLLEPNFRV ILRYNTALAY ALTVAHLSDR LRGAPGFSRD WPRTDRMLTT EERTDLQTRL
AALGYPVGGA DGKIGPKTRA AIRAFQEAKG LVPDGYADAA LLDRVRAANA PAP