Gene Mchl_3200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_3200 
Symbol 
ID7117539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp3379890 
End bp3380729 
Gene Length840 bp 
Protein Length279 aa 
Translation table11 
GC content73% 
IMG OID643525951 
Productcold-shock DNA-binding domain protein 
Protein accessionYP_002421966 
Protein GI218531150 
COG category[K] Transcription 
COG ID[COG1278] Cold shock proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.693924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.993369 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGACGTG GTCGTGATTT CAGGGGGCCG CAGAAGCGCG GCTTCGACGA GGGTGGTTCC 
GAGCCGCGTT GGCCCGATGA ACTGCCCCCG AGCGGTGGTG ACCGCTTCGG CGGCGGCGGT
AGCGCCGGCG GCAACCGCTT CGGCGGCGGT GGTGGTGGTT ACGGCGGCGG CGGCGGTGGC
GGCTTCGACC GCGGCCCGGC GCGCGCGGCG GCTGCACCGA CGGGACCGGA GCGTGATGCG
ACGGTTAAGT GGTTCAACAA GGAGAAGGGC TTCGGCTTCG TGGAGCTCGG CGACGGCTCC
GGCGATGCCT TCCTCCACAT CCGCGCGGTC GAGGCCGCCG GTCACGACGA CCTCCTTCCC
GGCACACGCC TGACGGTCCA GACCGCCCAG GGCCAGAAGG GCCCGCAGGT CACCGCAGTG
AACAGCGTCG ACACCTCCAC GGCCGAGGCG GCTCCGCCCC GGCGCGAGGC CCCGCGCTTC
GGCGGCGGCG GTGATCGCTT CGGCGGCGGT GGCGACCGCT TCGGCGGCGG CGGCGGCGGC
GGCGACCGTT TCGGTGGCGG CAGCCGTGAT CGCTTCGGCG GCGCGGGTGC TGGCGGCGGC
GGCGGTGGAC GTTTCGCCTC CGGCCCGTCG GTCGAGATGA CCGGCACCGT GAAGTGGTAC
GACCCGGCCA AGGGCTTCGG CTTCGTCTCG GTGAACGACG GCGGCAAGGA CGTGTTCGTG
CACCGTTCGG CGCTGTCCCG CGCCGGCCTC GACTCGCTGG CCGAAGGCCA GCAGGTCACC
CTCGGCGTGG TCGAGGGCCA GAAGGGCCGC GAGGCCTCGA GCATCACCGT CGAATACTAA
 
Protein sequence
MGRGRDFRGP QKRGFDEGGS EPRWPDELPP SGGDRFGGGG SAGGNRFGGG GGGYGGGGGG 
GFDRGPARAA AAPTGPERDA TVKWFNKEKG FGFVELGDGS GDAFLHIRAV EAAGHDDLLP
GTRLTVQTAQ GQKGPQVTAV NSVDTSTAEA APPRREAPRF GGGGDRFGGG GDRFGGGGGG
GDRFGGGSRD RFGGAGAGGG GGGRFASGPS VEMTGTVKWY DPAKGFGFVS VNDGGKDVFV
HRSALSRAGL DSLAEGQQVT LGVVEGQKGR EASSITVEY