Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_3108 |
Symbol | |
ID | 7118386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 3288810 |
End bp | 3289682 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643525859 |
Product | porin |
Protein accession | YP_002421874 |
Protein GI | 218531058 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3637] Opacity protein and related surface antigens |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0475237 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCT TCCTTCGCGC CGGCACGGCC ATCGCCGGCA TCGCCTTCGC CGGTTCGGCG CTCGCCGCCG ACCTCCCGCG CCGCGCGGCT CCGCCGCCGG TGTTCCAGCC GGTGCCGGTG TTCACCTGGA CGGGCTTCTA CGCCGGTTTC AACGCCGGTT ACGGCTTCGG CACCCAGGAT GACCGCGTCC CGACCGTGAT CGGCGTCGGC CCGGCCTCCC TGCTCGTGCC CCCGGGCACC ACCGCCGTGG TCGCCTTCAG CAACCGCGAG TCCAACGAAG GCTTCGTCGG CGGCGGTCAG ATCGGCTACA ACTACCAGTT CACCCCGGGC TCCGGTGTCG TGATCGGTGT CGAGGCCGAC GCCCAGTACG CCGATTTCGG CCGTGACCGG AACCGCTTCC TCTCGACCAG CCCGCTGGCC GCCCAGCAGG TGTTCAATCC GGGTGGTCTG TCCGGCCTCG ACTTCTTCGG CACCGTCCGC GGTCGCCTCG GCTACGCCTT CGACCGCACC CTCGTGTACG GCACCGGCGG CTTCGCCTAC GGCTCCGGCG GCGGTCGTGA GTTCGGCACC GGCGTGTCGA GCAACGACTT CCAGACCGGC TGGGCCGCCG GTGGTGGTAT CGAGTACGCT CTCCCGACCG ACTCGTTCCT GAACTTCTTC AAGTCGTCGG CCGTGACGCT GAAGGTCGAA GGTCTGTACG TGAACCTCGA CCGCGGCACC GGCGGCCGTG GCGCCTTCGC GACGGACAAC CAGGGCCGTA CGGTCTCCAT CGGCAGCCCG GGCACCGTGC TCGTCAGCGG TGGCCAGCAG GTCCGCGACA CCGAGTTCGC CGTCGTCCGC GCCGGCCTGA ACTACAAGTT CGGCTCGTAC TAG
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Protein sequence | MKSFLRAGTA IAGIAFAGSA LAADLPRRAA PPPVFQPVPV FTWTGFYAGF NAGYGFGTQD DRVPTVIGVG PASLLVPPGT TAVVAFSNRE SNEGFVGGGQ IGYNYQFTPG SGVVIGVEAD AQYADFGRDR NRFLSTSPLA AQQVFNPGGL SGLDFFGTVR GRLGYAFDRT LVYGTGGFAY GSGGGREFGT GVSSNDFQTG WAAGGGIEYA LPTDSFLNFF KSSAVTLKVE GLYVNLDRGT GGRGAFATDN QGRTVSIGSP GTVLVSGGQQ VRDTEFAVVR AGLNYKFGSY
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