| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2788 |
|---|
| Symbol | |
|---|
| ID | 7113978 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 2939346 |
|---|
| End bp | 2941082 |
|---|
| Gene Length | 1737 bp |
|---|
| Protein Length | 578 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643525536 |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_002421555 |
|---|
| Protein GI | 218530739 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGGGG CAACCGCAAT ACCGCGGTCC GGGGACGCAG TCAGGCCGAT GACTGCGGGT
GAGAAGAAGG TCATCATGGC CTCCTCGCTC GGGACCGTTT TCGAGTGGTA CGATTTCTAT
CTATACGGCT CGCTCGCTGC GATCATCGGC GCGCAGTTCT TCTCCGCATA CCCGGAGGCG
ACCCGCAACA TCTTCGCATT GTTGGCCTTC GCCGCAGGCT TCCTTGTGCG CCCGTTCGGC
GCACTGGTGT TCGGCCGGCT CGGCGACATG GTCGGTCGTA AGTACACCTT CCTCGTCACC
ATCCTGATCA TGGGCATCTC GACCTTCGCG GTCGGCCTGC TGCCCTCCTA CACGACCCTC
GCGGCCTACA ATGTCGGCTG GATTGCGCCG GTGACGCTGC TGGCGCTGCG CATGCTCCAG
GGTCTCGCGC TCGGCGGCGA GTACGGCGGC GCGGCGGTCT ACGTGGCCGA ACACGCTCCG
GCGGGACGAC GCGGCTTCTA CACCGCCTTC ATCCAGACCA CCGCGACGCT CGGCCTGCTG
CTCTCGCTGA TCATCATCCT CTCGACGCAA GGCTACGTGA ACAGCGCCTA TCCGGCGACC
ACGGTGACCA ACGCGGACGG GACCACGACC ACGCTGACGG CCTTCCAGGT CTGGGGCTGG
CGCATTCCGT TCCTCGTCTC GGTGGTGCTG CTCGCCATCT CGGTCTGGAT CCGCCTGCAG
ATGCAGGAGA GCCCGGCCTT CAAGAAGATG AAGGAGGAGG GCACCCACTC CAAGGCGCCG
CTCTCGGAAG CCTTCGGCCA GTGGAAGAAC GCCAAGTGGG CGCTGCTGGC CCTGCTCGGC
CTCACCGCCG GTCAGGCCGT GGTCTGGTAT ACCGGCCAGT TCTACGCGCT GTTCTTCCTG
CAGAGCATCC TGAAGGTCGA TCAGTTCACG GCCAACATCA TGATCGCTTG GTCGCTGATT
CTGGCCACCG GCGGCTTCCT GTTCTTCGGC AGCCTCTCGG ACCGGATCGG CCGCAAGCCG
ATCATCCTCG GTGGCTGCCT GATCGCGGCG CTCACCTATT TCCCGCTGTT CAACATGCTG
ACCGCCCAGG CCAACCCGGC CCTGCACGCG GCCCAGGCGA ACGTGCCGGT GGTGGTGAAG
ACGAACAAGG ACGATTGCTC GTTCCAGTTC AATCCGGTCG GTACCGCCAA GTTCACCAAG
GAGTGCGACG TCGCCAAGGC GCTGCTCGCC CGCTCCGCCG TGAACTACAC CACCGAGAAC
CAGCCGGCCG GCACGCCGAC CGTGGTCAGC ATCAAGGGCA AGGACTTCCC CGTCGCCGAT
CCAAGCTTCG CCAAGGCGGT GCCGGCGGCG CTGACCGAGG CGGGTTACCC GTCCGCGTCA
GCCAATCCGA CCGTGATTAA GGCCGCGAAC CCGATCGACA TCTTCACGGG TCAGAAGCTC
GCGGTCGTCG GCATCCTGAC GATCCTCGTC CTCTACGTGA CGATGGTCTA CGGCCCGATC
GCCGCCGCGC TGGTGGAGCT GTTCCCGACC CGGATCCGCT ACACCTCGAT GTCGCTGCCC
TACCACATCG GTAACGGCTG GTTCGGCGGC CTTCTGCCCG CCACCGCCTT CGCGATGGTG
GCCCAGACCG GCGACATCTA TTTCGGCCTC TGGTACCCGA TCGTGATCGC GCTCTTCACC
TTCGTGATCG GCCTGATCTT CATCCCCGAG ACCAAGGACC GGGACATCCT GTCCTGA
|
|---|
| Protein sequence | MAGATAIPRS GDAVRPMTAG EKKVIMASSL GTVFEWYDFY LYGSLAAIIG AQFFSAYPEA
TRNIFALLAF AAGFLVRPFG ALVFGRLGDM VGRKYTFLVT ILIMGISTFA VGLLPSYTTL
AAYNVGWIAP VTLLALRMLQ GLALGGEYGG AAVYVAEHAP AGRRGFYTAF IQTTATLGLL
LSLIIILSTQ GYVNSAYPAT TVTNADGTTT TLTAFQVWGW RIPFLVSVVL LAISVWIRLQ
MQESPAFKKM KEEGTHSKAP LSEAFGQWKN AKWALLALLG LTAGQAVVWY TGQFYALFFL
QSILKVDQFT ANIMIAWSLI LATGGFLFFG SLSDRIGRKP IILGGCLIAA LTYFPLFNML
TAQANPALHA AQANVPVVVK TNKDDCSFQF NPVGTAKFTK ECDVAKALLA RSAVNYTTEN
QPAGTPTVVS IKGKDFPVAD PSFAKAVPAA LTEAGYPSAS ANPTVIKAAN PIDIFTGQKL
AVVGILTILV LYVTMVYGPI AAALVELFPT RIRYTSMSLP YHIGNGWFGG LLPATAFAMV
AQTGDIYFGL WYPIVIALFT FVIGLIFIPE TKDRDILS
|
|---|
| |