| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2369 |
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| Symbol | |
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| ID | 7116947 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | + |
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| Start bp | 2496646 |
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| End bp | 2498532 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643525118 |
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| Product | TRAP C4-dicarboxylate transport system permease DctM subunit |
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| Protein accession | YP_002421142 |
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| Protein GI | 218530326 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component
[COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.193075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0167467 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACTCG ACGTGCAACT CGACGCGCCC GCGCCGGCCG CCCCCGTGCC CGCCGCCGGT
CAAAGCTCGT ATCTCCAGAC CTTCGATCGC GTCTTCGGGC GGATGGTCGA GATCCCCGCG
GCGATCCTCG TCGTCCTGGA GATCGTCGTG CTCCTGAGCG GCGTCGTCAG CCGCTACGCC
CTGCACCGGC CCCTGGTCTG GTCCGACGAA CTCGCCTCGA TCCTGTTCCT GTGGCTCGCC
ATGCTGGGGA CGGTCGTCGC CTTCCGGCGC GGCGAACATA TGCGCATGAC CGCCTTCGTC
GGCATGGCCA CGCCCCGCGC GCGGGCCTTC ATGGATACCC TGGCGATCGT GGCCGGCCTC
GTCTTCGTCG GGGTTCTGCT GGAGCCGGCC TTCGAGTTCG CGATCGAGGA ATCCTGGGTC
TACACGCCGG CCCTCGACCT CCCCAACACT TGGCGCGCCG CCGCCCTGCC GGTCGGGTTC
GCGCTGATGC TCGTCACCGC CGTGCTGCGC CTCGTGCAGG AGAGCGACTG GCGCCTCACG
GGCGCGGCTT TGGCTCTCGG GGCCGGCCTT GCCGCCGTGC TCGCCGGCCT GTCGCCGCTC
CTGAGCAGCA TCGGCAACCT CAACCTGCTG GTGTTCTTCC TGCTCGGCGT CGGCGCCCTG
GTGTTCTCCG GCGTGCCGAT CGCCTTCGCC TTCGGGCTCT CGACCTACGC CTACCTCATG
AGCACGACCT ACGCGCCCGC CATGGTCGTC GTTGGGCGCA TGGACGAGGG CATGAGCCAT
CTCATCCTGC TGGCCGTGCC GCTGTTCATC TTCCTCGGCC TCTTGATCGA GATGACCGGC
ATGGCCCGCG CCATGGTCGG TTTCCTGGCA AGCCTTCTGG GCCATGTGCG CGGCGGCCTG
CACTACGTGC TGGTGGGGGC GATGTATCTC GTCTCCGGCA TCTCCGGGTC GAAGGCCGCC
GACATGGCCG CCGTCGCCCC GGTGCTGTTT CCCGAGATGA AGGCGCGCGG CGCCAAGGAG
GGCGATCTCG TCGCGCTGCT CTCCGCGACC GGCGCCCAGA CCGAGACGAT CCCGCCCTCG
ATCGTTCTCA TCACCATCGG CTCGGTGAGC GGCGTCTCGA TCACCGCCCT GTTCACCGGC
GGGCTGCTGC CGGCCGTCGT CCTCGGCGCG ACGCTGTGCG CGCTGGTCTG GTGGCGCTAC
CGCGGCGAGG ACATGAGCCA CGTCGTCCGC CCCGGTCGGA AGGCGATCCT GAAGGCGCTC
GTCGTGGCGG TGCCGGCGCT CGCGCTCCCC TTTGTCATCC GGGCCGCGGT GATCGAGGGC
GTGGCCACCG CCACCGAGGT CTCGACGATC GGCATCGTCT ACGCCGTGCT GGCGGGGCTC
CTCGTCTACC GGCAGTTCGA CTGGCGTCGC CTCATGCCCA TGCTGGTGAC GACGGCGACG
CTGTCGGGGG CGATCCTGCT GATCATCGGC GCGGCCACCG CCATGGCCTG GGCGCTGACG
CAGTCCGGCT TCTCGCAGGC GCTCGCCGTC GCGATGAAGG AACTGCCCGG CGGCGCGCTC
GGCTTCCTCG TGGTCTCCGC CCTCGCCTTC ATCGTGCTGG GCTCGGTGCT GGAGGGAATC
CCGGCGATCG TCCTGTTCGG CCCGCTGATG TTTCCCATCG CCCGGGCCGT GGGCGTGCAC
GAGGTGCACT ACGCCATGGT CGTGGTGCTC GCGATGGGAA TCGGCCTGTT CGCCCCGCCC
TTCGGCGTCG GCTACTACGC GGCCTGCGCC ATCAGCCGCA TCCATCCCGA TGCCGGCATG
CGGCCGATCA TCGGCTACGT CGCGGCGCTG CTGGTCGGGC TGATCGTGAT CATCCTGGTG
CCCTGGTTCT CGATCGGCTT CCTCTAA
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| Protein sequence | MQLDVQLDAP APAAPVPAAG QSSYLQTFDR VFGRMVEIPA AILVVLEIVV LLSGVVSRYA
LHRPLVWSDE LASILFLWLA MLGTVVAFRR GEHMRMTAFV GMATPRARAF MDTLAIVAGL
VFVGVLLEPA FEFAIEESWV YTPALDLPNT WRAAALPVGF ALMLVTAVLR LVQESDWRLT
GAALALGAGL AAVLAGLSPL LSSIGNLNLL VFFLLGVGAL VFSGVPIAFA FGLSTYAYLM
STTYAPAMVV VGRMDEGMSH LILLAVPLFI FLGLLIEMTG MARAMVGFLA SLLGHVRGGL
HYVLVGAMYL VSGISGSKAA DMAAVAPVLF PEMKARGAKE GDLVALLSAT GAQTETIPPS
IVLITIGSVS GVSITALFTG GLLPAVVLGA TLCALVWWRY RGEDMSHVVR PGRKAILKAL
VVAVPALALP FVIRAAVIEG VATATEVSTI GIVYAVLAGL LVYRQFDWRR LMPMLVTTAT
LSGAILLIIG AATAMAWALT QSGFSQALAV AMKELPGGAL GFLVVSALAF IVLGSVLEGI
PAIVLFGPLM FPIARAVGVH EVHYAMVVVL AMGIGLFAPP FGVGYYAACA ISRIHPDAGM
RPIIGYVAAL LVGLIVIILV PWFSIGFL
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