Gene Mchl_2247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_2247 
Symbol 
ID7114804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2362056 
End bp2363306 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content70% 
IMG OID643524998 
ProductNa+ dependent nucleoside transporter domain protein 
Protein accessionYP_002421022 
Protein GI218530206 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1972] Nucleoside permease 
TIGRFAM ID[TIGR00804] nucleoside transporter 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00577659 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGACA GGTTGTTCCA TGCGGGCGCG AGCGTTGCCC TGCTGCTCGC CGTGGCGTGG 
CTGTTCTCGG TGAACCGGCG GGCGATCCGG CCACGGGTGG TGCTGGCCGC CCTGGCGCTT
CAGGTCGGGA TCGGCGCGCT GATGCTGTTC GTGCCCGCCG GGCAGAGGGC GCTCGGCGCG
GTGGCGGATG TCGTCACCAC CGTGCTCTCC TTCGGCGACC GGGGCACCGC CTTCCTGTTC
GGCGGCCTTG TCGAGCCGCG CATGTTCGAG CTGTTCGGCG GCTCGGGCTT CATCCTAGCC
CTGCGGGTGC TGCCGCAGAT CCTCTACGTC TCGGCGCTGA TCGGCGTGCT CTACCATCTG
GGGGTGATGC AGGCGCTGGC CCGGTTTCTC GGCGCGGGTT TGCGAAAACT GCTCGGCACC
TCGCCGATCG AATCGTTCTC GGCGGTCGTC ACCATCTTCA TCGGGCAGAG CGAGATCGCC
GTGGCCCTGC GCCCCTTCCT CGCGGCGCTG ACCGGGGCCG AACTGTTCGC GGTGATGACG
AGCGGGGCGG CCTCCACCGC CGGCTCGATC CTCGCCGGAT ACGCCGCACT CGGCGTGCCG
ATGCCGTATC TCCTCGCCGC CTCGTTCATG GCGATTCCCG GCGGGCTGCT CTATGCCAAG
ATCCTCGTGC CCTCGACCGA GCCGACGCGC ATCCTCACGA CACGCGTCGA GTTCGGCGAG
GCGCGCGCGG CCAACCTGAT CGAAGCCGCC GCCGACGGCA CGCAGAAGGG CCTCGGCGTC
GCGGTCGCGG TCGGCGCCAT GCTGATCGCC TTCGTCGGGC TGATCGCGCT GGTGAACGCC
GCCATCGGCT GGACCGGCGG CGTGTTCGGG TTCGCCGGGC TCTCGATCGA GGGCATTCTC
GGCGTCGTGC TGGCGCCGCT GGCCTGGCTC CTGGGCGTGC CGTGGGAGCA GGCTACCCTC
GTCGGCGGCG CCATCGGCCA GAAGATCGCC TTCAACGAAT TCCTGGCCTA TGCCAGCCTC
TCGCCGATTC TGAAGGCGGG CACCCTCGAC CCGCGCACGA GCGCGATCCT GTGCTTCGCG
CTCTGCGGCT TCGCCAACCT CGCCTCGGTG GCGATTCAGC TCGCGAGCTT CACCAGTCTC
GCTCCCGAGC GCCGGCCCGA GATCGCCCGG TTCGGCCTGC GCGCGATCCT CGCAGGCACG
CTCTCGAACC TCACCAGCGC GGCCATCGCC GGATTGTTCA TCACCGGGTA A
 
Protein sequence
MLDRLFHAGA SVALLLAVAW LFSVNRRAIR PRVVLAALAL QVGIGALMLF VPAGQRALGA 
VADVVTTVLS FGDRGTAFLF GGLVEPRMFE LFGGSGFILA LRVLPQILYV SALIGVLYHL
GVMQALARFL GAGLRKLLGT SPIESFSAVV TIFIGQSEIA VALRPFLAAL TGAELFAVMT
SGAASTAGSI LAGYAALGVP MPYLLAASFM AIPGGLLYAK ILVPSTEPTR ILTTRVEFGE
ARAANLIEAA ADGTQKGLGV AVAVGAMLIA FVGLIALVNA AIGWTGGVFG FAGLSIEGIL
GVVLAPLAWL LGVPWEQATL VGGAIGQKIA FNEFLAYASL SPILKAGTLD PRTSAILCFA
LCGFANLASV AIQLASFTSL APERRPEIAR FGLRAILAGT LSNLTSAAIA GLFITG