| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_2132 |
|---|
| Symbol | |
|---|
| ID | 7115916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | + |
|---|
| Start bp | 2229898 |
|---|
| End bp | 2230842 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643524882 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_002420907 |
|---|
| Protein GI | 218530091 |
|---|
| COG category | [C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.740192 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAGA AAGTCGTCTT CCTCGATCGC GAGTCGCTCG ACGCGACCGT GCGCGAATTC
AACTTCCCGC ACGAGTACAA GGAATACGAG TCGACCTGGA CGCCGGAGGA GATCGTCGAG
CGCCTTCAGG GCGCCGAGAT CGCGATGATC AACAAGGTGC CGATGCGCGC CGACACGCTG
AAGCAGCTTC CCGACCTGAA GCTGATCGCG GTGGCTGCCA CGGGCACGGA CGTCGTCGAT
AAGGCTGCGG CCAAGGCGCA GGGCATCACG GTCGTCAACA TCCGCAACTA CGCCTTCAAC
ACCGTGCCCG AGCACGTGGT CGGCTTGATG TTCGCCCTGC GCCGGGCGAT CGTGCCTTAC
GCCAACTCGG TGCGCCGGGG CGATTGGAAC AAGTCGAAGC AGTTCTGCTA CTTCGATTAC
CCGATCTACG ACATCGCCGG CTCGACGCTC GGCATCATCG GCTACGGCGC GCTCGGCAAG
TCGATCGCCA AGCGGGCCGA GGCCCTCGGC ATGAAGGTGC TCGCCTTCGA CGTGTTCCCG
CAGGACGGGC TAGTGGATCT CGATACGATC CTGACCCAGT CCGACGTCAT CACGCTGCAC
GTGCCGCTGA CGCCCGACAC CAAGAACATG ATCGGGGCCG AGCAGCTCAA GAAGATGAAG
CGGTCCGCGA TCCTCATCAA CACCGCCCGC GGCGGGCTGG TGGACGAGGC GGCCTTGCTC
CAGGCGCTCA AGGACGGCAC CATCGGCGGC GCCGGCTTCG ACGTCGTGGC CCAGGAGCCC
CCGAAGGACG GCAACATCCT CTGCGACGCC GACCTGCCGA ACCTGATCGT CACCCCGCAC
GTGGCCTGGG CGAGCAAGGA GGCGATGCAG ATCCTCGCCG ACCAGCTCGT GGACAACGTC
GAGGCCTTCG TCGCGGGCAA GCCGCAGAAC GTCGTCGAGG CGTAA
|
|---|
| Protein sequence | MTKKVVFLDR ESLDATVREF NFPHEYKEYE STWTPEEIVE RLQGAEIAMI NKVPMRADTL
KQLPDLKLIA VAATGTDVVD KAAAKAQGIT VVNIRNYAFN TVPEHVVGLM FALRRAIVPY
ANSVRRGDWN KSKQFCYFDY PIYDIAGSTL GIIGYGALGK SIAKRAEALG MKVLAFDVFP
QDGLVDLDTI LTQSDVITLH VPLTPDTKNM IGAEQLKKMK RSAILINTAR GGLVDEAALL
QALKDGTIGG AGFDVVAQEP PKDGNILCDA DLPNLIVTPH VAWASKEAMQ ILADQLVDNV
EAFVAGKPQN VVEA
|
|---|
| |