Gene Mchl_1980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1980 
Symbol 
ID7118680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp2062384 
End bp2064150 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content71% 
IMG OID643524733 
Producttype I secretion system ATPase 
Protein accessionYP_002420758 
Protein GI218529942 
COG category[R] General function prediction only 
COG ID[COG4618] ABC-type protease/lipase transport system, ATPase and permease components 
TIGRFAM ID[TIGR01842] type I secretion system ABC transporter, PrtD family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.15427 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCCA GAGATCAGAA AAAGCTCGCT CAGCAGCGTT GTGCCGAGCA GCTGACCCAA 
AGCGTTCGGG GGCCCTTCGT CTTTCTGTTC GGGATGTCCG GGATCATCAA CATCCTGGCG
TTGACCGGCT CGTTCTACAT GCTGCAGGTC TACGACCGCG CCCTGCCGAG CGGGAGCCTG
CCGACGCTCG TCGGGCTGTC GATCCTCGCC GTCGGACTCT ACCTGGCGCA GGGCCTGTTC
GACGTTCTCC GCTCGCAGAT CCTGGTTCGC CTCGGGGCGC AGTTCGACCG CCGGGTCGCT
CCGCTGGCGC AGCGGGTCGG GATCGACATG CCGCGCTTCG GCTTCTCGAC CGCAGAGGCG
ATGGAGCGCG GCCGCGACGT CGATACGGTG CGCGGCTTCC TCGGCAGCCC CGGTCTCGTC
GCCCTGTTCG ACCTGCCGTG GGTGCCGGTC TTCCTCGTCT TCGTCTACAT GCTGCACCCC
TATCTCGGCG CGCTCACCGT CGCGGGGGCG GTCGTCCTCG CGCTGCTGAC CATCCTCGCC
GAGCTCCTGA CCCGGCGCTG GACCGGCGCG ACGCAGCAGG CCGTGGTGGC CCGCAACGCC
ATCGCGGACT CGAACGCGCG CAGCGCCGAC GTGCTCAAGG CGATGGGCTT CGCCGACCGG
GCCGTGGACC GCTACCGCCG CGCCAACGAC GAACACCTCG ACCTGCAGAC CCGCACCACC
GACATCAGCG GCACGTTCGG GGCGATCGCG CGCGTCCTGC GCATGATCCT GCAATCGGCC
GTGCTCGGGC TCGGCGCCTA CCTCGTCATC GGCGGCGAAC TCTCTGCCGG GGCGATCATC
GCGGCTTCGA TCACCTCCGC CCGCGCCATG GCGCCCATCG ACCAGGCGAT CGGCAACTGG
AAGGTCATCC TGGCCGCGCG GACCGCCTTC CGGCGCTTGA AGGAGACCGT GATCGCCCTG
GCCGCCGCCG AGCCGCCGAT GACGCTGCCG CCGGCGCACC GGTCGCTCAG GGTCGGCCAC
ATCACGGTCG CGGCCCCCGG CTCGGGTCGC GTGCTCCTCT CGGATGTCGG GTTCGAACTC
AAGGCCGGGC AGGCGCTCGG CGTCATCGGA CCGAGCGGCG GCGGCAAGAC CACCCTCGGC
CGCGCGCTGA CCGGCATCTG GCCGCTGCTG CGCGGCAGCG TGCGGTTCGA CGAGGCCGAC
CTGCCGCAAT GGGACGAGGC GAGCCTGGGT GGGATGATCG GCTACCTGCC TCAGGAGGTC
TGCCTCCTCG ACGCGACGGT CGAGGAGAAC ATCTCGCGCT TGGCCGAGGA CAGCAATCCA
GCGCTGGTCG TGGCGGCCGC GCAGGCGGCC GGCGTGCACG AGATGATCCT GCGGATGCCC
GACGGCTACA AGACCGAACT CGGACCGCTC GGGACGGCGC TCTCGGGCGG GCAGCGGCAG
CGGATCGCTC TCGCCCGCGC GCTCTACGGC AATCCCTTCC TCGTCGTCCT CGACGAGCCG
AACGCGAACC TCGATGCCGA GGGCGAGGCT GCGCTCGCCG CGGCGATCCA GGGCGTGCGT
GCCCGCGGCG GCCTCGCGAT CGTGATCGCC CACCGCCCGA GCGTGCTGGC GGCCGTGGAT
CTGATCGCCG TGATCCAGGA CGGCAAGCTC ACGGCATTCG GCCCGAAGGA GGCGATCCTC
GGCAAGGCCG CCCGCGACGG TGCGGCCAAG CCCGACAGCG CCCAGGACAA CAGGGAGCGC
TCCATGCCGG AGCGGGTGCC CGCATGA
 
Protein sequence
MRSRDQKKLA QQRCAEQLTQ SVRGPFVFLF GMSGIINILA LTGSFYMLQV YDRALPSGSL 
PTLVGLSILA VGLYLAQGLF DVLRSQILVR LGAQFDRRVA PLAQRVGIDM PRFGFSTAEA
MERGRDVDTV RGFLGSPGLV ALFDLPWVPV FLVFVYMLHP YLGALTVAGA VVLALLTILA
ELLTRRWTGA TQQAVVARNA IADSNARSAD VLKAMGFADR AVDRYRRAND EHLDLQTRTT
DISGTFGAIA RVLRMILQSA VLGLGAYLVI GGELSAGAII AASITSARAM APIDQAIGNW
KVILAARTAF RRLKETVIAL AAAEPPMTLP PAHRSLRVGH ITVAAPGSGR VLLSDVGFEL
KAGQALGVIG PSGGGKTTLG RALTGIWPLL RGSVRFDEAD LPQWDEASLG GMIGYLPQEV
CLLDATVEEN ISRLAEDSNP ALVVAAAQAA GVHEMILRMP DGYKTELGPL GTALSGGQRQ
RIALARALYG NPFLVVLDEP NANLDAEGEA ALAAAIQGVR ARGGLAIVIA HRPSVLAAVD
LIAVIQDGKL TAFGPKEAIL GKAARDGAAK PDSAQDNRER SMPERVPA