Gene Mchl_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1930 
Symbol 
ID7116745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1995991 
End bp1997394 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content67% 
IMG OID643524694 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_002420721 
Protein GI218529905 
COG category[C] Energy production and conversion 
COG ID[COG1249] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes 
TIGRFAM ID[TIGR01350] dihydrolipoamide dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACG ATCTCATCGT CATCGGCACC GGCCCCGGCG GCTATGTCTG CGCCATCCGC 
GCGGCCCAGC TCGGACTGAA GACCGCGGTG GTCGAGAAGC GGGCGACCCA CGGCGGCACC
TGCCTCAATG TCGGCTGCAT CCCCTCGAAG GCGCTGCTGC ACGCATCGGA AGCCTTCGAG
GAGGCCAACA AGCACTTTTC GGAGTTGGGC ATCGACGTGG GCACGCCGAA GCTTGATCTC
AAAAAAATGC AGAGCTTCAA GCAGAGTGGC GTCGACGGCA ACACCAAGGG CGTCGAGTTC
CTGCTCAAGA AGAACAAGGT CGATACCTAT CACGGCCGCG GCCGCATCGC CGGGGCCGGC
CGCGTCGAGG TGATCTCGGA CGACGGCGGC AACCAGTTGC TGGAGACGAA GAACATCGTC
ATCGCCACCG GCTCCGACGT GACCCGGCTG CCCGGCGTCG AGATCGACGA GAAGACCGTG
GTCTCCTCCA CCGGCGCGCT TGAACTCGCC GAGGTGCCCA AGCGCCTCGT GGTGATCGGC
GCGGGCGTGA TCGGGCTCGA ACTCGGCTCG GTCTGGCGCC GCCTCGGCGC CGAGGTCACC
GTGATCGAGT ATCTCGACCG GGTGCTGCCG GGCATGGACG GCGAGGTCGG AAAGCAGTTC
CAGCGCATCC TGGCCAAGCA GGGCATGGTC TTCAAGCTCT CGACCAAGGT GACCGGTGTC
GAGACCGGCA AGAAGGGCCG CGCCACCGTC ACCGTCGAGC CGGCGCAGGG CGGCGAGCCG
GAGAAGCTCG AGGCCGACGT GGTGCTCGTG GCCATCGGCC GGGTGCCCTA CACGGAAGGG
CTCGGGCTCG AGACGGTGGG CGTGGCGACC GACGACAAGG GCCGGATCGA GGTCGATTCG
CACTACGCCA CCAACGTCAC CGGCATCTAC GCCATCGGCG ACGTGATCGC CGGGCCGATG
CTCGCCCACA AGGCGGAGGA CGAGGGCGTC GCGGTCGCCG AGATCCTGGC GGGCCAGTCG
GGCCACGTGA ATTACGGCGT GATCCCGAAC GTGGTCTACA CCTTCCCCGA GGTCGCCTCG
GTCGGCAAGA CCGAGGAGGA GCTGAAGAAG GACGGTATCG CCTACAACGT CGGCAAGTTC
CCCTTCACCG CCAACGGCCG GGCCAAGGCC AACGGCACCA CCGACGGCTT CGTAAAGATC
CTCGCGGACG CGCAGACCGA CCGAGTGCTC GGCGTGCACA TCGTCGGGGC GGATGCCGGC
AACCTCATCG CCGAGGTCGC GGTGGCGATG GAGTTCGCAG CCTCCGCCGA GGACATCGCC
CGCACGTGCC ACGCCCACCC GACGCTGACC GAGGCGATCA AGGAAGCCGC CCTCGCCGTC
GACAAGCGCG CGATCCACGT CTGA
 
Protein sequence
MSYDLIVIGT GPGGYVCAIR AAQLGLKTAV VEKRATHGGT CLNVGCIPSK ALLHASEAFE 
EANKHFSELG IDVGTPKLDL KKMQSFKQSG VDGNTKGVEF LLKKNKVDTY HGRGRIAGAG
RVEVISDDGG NQLLETKNIV IATGSDVTRL PGVEIDEKTV VSSTGALELA EVPKRLVVIG
AGVIGLELGS VWRRLGAEVT VIEYLDRVLP GMDGEVGKQF QRILAKQGMV FKLSTKVTGV
ETGKKGRATV TVEPAQGGEP EKLEADVVLV AIGRVPYTEG LGLETVGVAT DDKGRIEVDS
HYATNVTGIY AIGDVIAGPM LAHKAEDEGV AVAEILAGQS GHVNYGVIPN VVYTFPEVAS
VGKTEEELKK DGIAYNVGKF PFTANGRAKA NGTTDGFVKI LADAQTDRVL GVHIVGADAG
NLIAEVAVAM EFAASAEDIA RTCHAHPTLT EAIKEAALAV DKRAIHV