| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_1923 |
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| Symbol | |
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| ID | 7116738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium chloromethanicum CM4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011757 |
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| Strand | - |
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| Start bp | 1984870 |
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| End bp | 1986609 |
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| Gene Length | 1740 bp |
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| Protein Length | 579 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 643524687 |
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| Product | Shikimate kinase., 3-dehydroquinate synthase |
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| Protein accession | YP_002420714 |
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| Protein GI | 218529898 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0337] 3-dehydroquinate synthetase
[COG0703] Shikimate kinase |
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| TIGRFAM ID | [TIGR01357] 3-dehydroquinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0886542 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGTCC CCCTGCCGCC GGCGCCGCCG CCCGGCGAAC CGATCGAAGC ACGACTGCGC
CGCGGCCTCG GAGCCCGGTC GATCGTGCTC GTCGGCCTGA TGGGGGCGGG CAAGAGCACC
GTCGGGCGCC GCCTGGCGGG GCGTCTCGGG CTGATGTTCA AGGATGCCGA TCACGAGATC
GAGGCGGCGG CCAAGCTCAC CATCGCCGAC ATTTTCTCGA TCTACGGCGA GGCGAGCTTC
CGCGAGGGCG AGGAACGGGT GATCGCGCGT CTGCTGCGCG AGGGGCCGAT GGTGCTGGCC
ACCGGAGGCG GCGCCTTCAT GCGCGAGGCG ACGCGGGCGC GGATCGCCGA GGGGGCCATC
TCGGTCTGGC TCAAGGCCGA CCTCGACGTG CTGATGCGAC GCGTGCGCAA ACGCAACACG
CGCCCTCTGC TCCAGACCGA GGATCCGGAG GCGACCATGC GCACACTGAT GGAGGTGCGC
CATCCGGTCT ATGCCCAAGC CGATGTCACG GTGCTGTCCC GCGAAGTGTC CCACGACCGC
GTGGTGGAGG ACGTGATGGA AGCTCTCGAT ATCCACATCA ACCCGTCTCA TACGACACAA
TCACAACATT TGACATTCAG TATGACGCAG CAACCCTCGC GTGTGAACGT TCCCCTGTCG
GGTGGACGCG AATACGATAT TCGGATCGGT CGGGGTCTTA TCGACGCGGT GGGTGCGGAG
GCGCGGGATC TCGGCGCCCG GGCTGCCGGT ATCGTCACCG ACGAGACGGT CGCCGGCCTC
TACGGCGAGC GTGTGCGGGC CAGCCTCGAG GCCGCCGGGT TGCGCTGCGG CATCATCGCC
GTGCCGCCGG GCGAAGCTTC GAAGAGCTAC GCGGAATTCG CCCGCGTCTG CGACGGGCTC
CTGGCCCAGA AGATCGAGCG CGGCGACCTC GTCGTGGCGC TCGGCGGCGG CGTGGTCGGC
GATCTCGCGG GTTTTGCGGC GGCCTCCCTG CGGCGCGGTG TCCGCTTCCT CCAGGTTCCA
ACGACCTTGC TCGCGCAGGT TGATTCCTCG GTGGGGGGAA AGACCGGGAT CAACTCGCCG
CTCGGCAAGA ATCTGATCGG CGCCTTCCAC CAGCCCCGCC TCGTACTGGC CGACACCGCC
ACCCTCGACA CGCTCTCGGA GCGCGAGATG CGGGCGGGTT ACGCCGAGGT CGCCAAGTAT
GGCTTGATCG GGGATGCCGG CTTCTTCGAG TGGTGCGAGG CGAACTGGGC CGGCATCTTC
TCCGGCGGGC CGGAGCGCGA CGAGGCGGTG GCCGCCTGCT GCCGCGCCAA GGCCGGCGTC
GTGACCCGCG ACGAGCGGGA GGACGGCGAA CGCGCCCTGC TCAATCTCGG CCACACCTTC
GGCCACGCCC TGGAGCGGCT GACCGGCTAC GACGCGGCCC GCCTCGTCCA CGGCGAGGGC
GTCGCGATCG GTCTGGCGCT GGCCTTCCGC TTCTCGGCCC GGCTCGGCCT CTGCCCCGGC
CAGGATGCGG GGCGGGTGGC CAACCACCTC GCGCTCGCCG GCCTTCCGAC CCGCCTGCAA
CAGGTGCCCG GCGGGGCCGG CGACCCGGAT GCCCTCCTCG ACGCCATGGC CCAGGACAAG
AAGGTCCGCG ACGGGCAGCT CACCTTCATC CTCGCCCACG GCATCGGCCA GAGCTTCATC
GCGCCGGGCA TCGATGCGGC GGAGGTGCGG GCCTTCCTGG AGACGGAGTT GCAGGGCTGA
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| Protein sequence | MTVPLPPAPP PGEPIEARLR RGLGARSIVL VGLMGAGKST VGRRLAGRLG LMFKDADHEI
EAAAKLTIAD IFSIYGEASF REGEERVIAR LLREGPMVLA TGGGAFMREA TRARIAEGAI
SVWLKADLDV LMRRVRKRNT RPLLQTEDPE ATMRTLMEVR HPVYAQADVT VLSREVSHDR
VVEDVMEALD IHINPSHTTQ SQHLTFSMTQ QPSRVNVPLS GGREYDIRIG RGLIDAVGAE
ARDLGARAAG IVTDETVAGL YGERVRASLE AAGLRCGIIA VPPGEASKSY AEFARVCDGL
LAQKIERGDL VVALGGGVVG DLAGFAAASL RRGVRFLQVP TTLLAQVDSS VGGKTGINSP
LGKNLIGAFH QPRLVLADTA TLDTLSEREM RAGYAEVAKY GLIGDAGFFE WCEANWAGIF
SGGPERDEAV AACCRAKAGV VTRDEREDGE RALLNLGHTF GHALERLTGY DAARLVHGEG
VAIGLALAFR FSARLGLCPG QDAGRVANHL ALAGLPTRLQ QVPGGAGDPD ALLDAMAQDK
KVRDGQLTFI LAHGIGQSFI APGIDAAEVR AFLETELQG
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