Gene Mchl_1799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1799 
Symbol 
ID7114594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1855448 
End bp1856146 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content72% 
IMG OID643524563 
Productorotidine 5'-phosphate decarboxylase 
Protein accessionYP_002420590 
Protein GI218529774 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0284] Orotidine-5'-phosphate decarboxylase 
TIGRFAM ID[TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.177098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.189047 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGAGA GTGCCGACCC TCGCGACCGC CTGATCGTCG CCCTCGACCT GCCCGACGTG 
GAGGCGGCGG AGCGGCTCGT CGCGCGCATC GGTGACGCGG TGACCTTCTA CAAGATCGGC
TACCGGCTGG CCTATGCGGG CGGGCTCGAT TTCGCCGCGC GGCTGGCGAA GAGCGGCAAG
AAGACCTTTC TCGATCTCAA GCTCCACGAC ATCGGCAACA CCGTCGAGGA GGGGGTGCGC
TCGGCCTCGG CCCTGGGCGC GACCTTTCTG ACGGTGCACG CCTATCCGCA GACCATGCGC
GCGGCCGTGC GCGGGCGGGG GTCGGGCCTG AAGATTCTCG CCGTCACCGT GCTGACCTCC
TACGATGACG CCGACGCGGC CGAAGCCGGC TACGCGCTCC CCGTCGCCGA CCTCGTGGCG
CGCCGCGCGG AGCAGGCGGC TGAGATCGGC ATCGACGGGA TCGTCTGCTC AGCGGCCGAA
GCCGGAGCGG TGCGCCACCG GATCGGCCCG TCGGGGTTGA TCGTGACGCC CGGCATCCGC
CCGGCGGGCG CGGAGGCCGG CGACCAGAAG CGGGTGATGA CGCCGGGGCA GGCGCGGGCG
GCGGGCATCG ACCATGTGGT GGTCGGACGC CCGATCACCG GCGCCGACGA CCCCCGTGCC
GTCGCGCAGA GAATCGTTGC CGAGATGGAG GACGCTTAG
 
Protein sequence
MPESADPRDR LIVALDLPDV EAAERLVARI GDAVTFYKIG YRLAYAGGLD FAARLAKSGK 
KTFLDLKLHD IGNTVEEGVR SASALGATFL TVHAYPQTMR AAVRGRGSGL KILAVTVLTS
YDDADAAEAG YALPVADLVA RRAEQAAEIG IDGIVCSAAE AGAVRHRIGP SGLIVTPGIR
PAGAEAGDQK RVMTPGQARA AGIDHVVVGR PITGADDPRA VAQRIVAEME DA