| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mchl_1767 |
|---|
| Symbol | |
|---|
| ID | 7114562 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium chloromethanicum CM4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011757 |
|---|
| Strand | - |
|---|
| Start bp | 1819957 |
|---|
| End bp | 1820823 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 643524531 |
|---|
| Product | shikimate 5-dehydrogenase |
|---|
| Protein accession | YP_002420558 |
|---|
| Protein GI | 218529742 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0169] Shikimate 5-dehydrogenase |
|---|
| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.393552 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.147032 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCTCG ACTTTCGCAA GCAGGTTTCC ATGACAGCCA GGGCCTTCGT CGTCGGCCAT
CCGATCCGGC ATTCCCGCTC GCCGCTGATC CATGGGCACT GGCTCGCCGA GCACGGGTTG
GACGGCAGTT ACGAGCGCAT CGACGTGGCG CCGGAGGCGT TCGAGGCCTT CATCCGCGGG
CTTCCGGCCT CGGGCTTTGC CGGCGGCAAC GTCACCATCC CGCACAAGGA GGCGGCCTTT
CGGCTGGCGG ACTCTCTAAC GCCCCGTGCC AAAAAAATCG GCGCCGTGAA CACGCTGATC
GTCGAGGGCG GCCGCGTCCG CGGCGATAAC ACCGACGCGC CGGGCTTCAT CGCCCATCTC
GATCACAGCC TCGGGGCGCG CTGGCCCGAG CGGACCGGCG GGTTCGCCCT CGTGCTCGGC
GCGGGCGGCG CGGCGCGCGC CATCGTCGTC GGGCTGGTGG AGCGGGGGCT CTCGGTCCGC
GTCGCCAACC GCAGCCCCGA GCGGGCGCGG GCGCTCGCCG AACTCGATCC CGAACACATC
GAGGCGCTGG CCTGGGAGGC CGTGCCGGAC GCGCTTTCCG ACACCGGGCT TCTCGTCAAC
ACCACCTCGC TCGGGATGGC AGGTCACCCG CCGCTCGAAA TCGACCTCGC CCCGCTCCCG
GACCGCGCGG CGGTGGCCGA CATCGTCTAC GTGCCGCTGG AGACGCCGCT GCTCGCCGCG
GCGCGGGCGC GGGGGCTCGC GGCGGTCGAT GGGCTCGGCA TGCTGCTGCA CCAGGCGGTG
CCGGGATTCG AAGCTTGGTT CGGCCTGCGG CCCGAGGTGA CGCCGGCCCT GCGCCAAACA
ATCGTCGCGG ATCTCGTCGC GAAATGA
|
|---|
| Protein sequence | MSLDFRKQVS MTARAFVVGH PIRHSRSPLI HGHWLAEHGL DGSYERIDVA PEAFEAFIRG
LPASGFAGGN VTIPHKEAAF RLADSLTPRA KKIGAVNTLI VEGGRVRGDN TDAPGFIAHL
DHSLGARWPE RTGGFALVLG AGGAARAIVV GLVERGLSVR VANRSPERAR ALAELDPEHI
EALAWEAVPD ALSDTGLLVN TTSLGMAGHP PLEIDLAPLP DRAAVADIVY VPLETPLLAA
ARARGLAAVD GLGMLLHQAV PGFEAWFGLR PEVTPALRQT IVADLVAK
|
|---|
| |