Gene Mchl_1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1671 
Symbol 
ID7116816 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1722376 
End bp1724577 
Gene Length2202 bp 
Protein Length733 aa 
Translation table11 
GC content74% 
IMG OID643524435 
Productpenicillin-binding protein 1C 
Protein accessionYP_002420462 
Protein GI218529646 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC 
TIGRFAM ID[TIGR02073] penicillin-binding protein 1C 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.60886 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG ACACTGCCTT CCCTCCCCCC TCTGCGGGGG AGGGTGGCCC GCGAAGCGGG 
TCGGGTGAGG GGAACGCCCT CTCCGGACAC GTCGCCCCCT CTCCCGCCTG CTCCGCAGGC
ACCCTCCCCC GCAGAGGGAG GAGGGTTCTT CTCGCCCTCT TCGTCATCGT CGCGCTTCTG
CTGGCCGGCG CCCTCTGGCG CTACGCCACG ACCCTCCCGC CCCTCGACCT GACCCAGGCC
TCGCTCCGCT CCACCGTCAT CCTCGATCGC AAGGGACAGC TCCTGCGCCC CTTCGCCACC
GCCGACGGGC GCTGGCGCCT GCCCGTCAGC GCGGACGCGA TCGATCCGCG ATACCTTGCC
ATGCTCAAGG CCTACGAGGA TCGCCGCTTC GACAGCCATC CCGGCATCGA TCCGGCGGCG
ACGCTCCGCG CCGCGTGGCA ATGGCTCGCC CATGGAAAAA TCGTGTCGGG CGGCTCGACG
CTGTCGATGC AGGTCGCCCG CCTCGTCGAG CCGCGGGCCG AGCGCTCGCT CCCCGCAAAG
CTCCGGCAGA TGGTCCGCGC GGTCGAACTG GAGCGTACAC TCGGCAAAGC GGGCGTGCTC
GACCTCTATC TCGCGCTGGC CCCCTATGGC GGCCCGGTCG AGGGCGTGCG GGCGGCGAGT
CTGGCCTATT TCGGTCGCGA GCCGGCCCGC CTGTCGTTTG CCGAGAGCGC GCTCCTCGTC
GCCCTGCCGC AATCACCGGA GGCACGCCGG CCCGACCGCT TCGCCGCCAA TGCGCGGCGC
GCCCGCGACC GGGTGCTCGA CATCGCCGCC GAGCGCGGCG TGCTGACCGC CGCCGAAGCG
CAGGCCGCCA AGGCGGAGCC GGTGCCGGTT GCGCGAAAAC AATTCCCGAT GCTTGCCGCC
CATGCCGCCG AGCAGGCCCA CGCCGCCGAC CCGGACGCGC GGGTGCAGCA TCTGACGCTC
GACGCGCGCC TTCAGGCGAG CCTCGAGGCG CTGGCGACCG AGCGCACGGC GGCCGCCGGC
CCGGCGCTCT CCGCCGCGAT CCTCGCCATC GACAATCGCA CCGGCGCGGT GCTCGCCCAT
GTCGGCAGCG CCGGCTATCT CGACGCCGCC CGCGCCGGTG CCGTCGATGC CACGCAGGCG
GTGCGCTCGC CGGGCTCGGC GCTCAAGCCC TTCATCTACG CGCTCGCCTT CGAGGACGGG
CTTGCCCACC CGGAAACGCT CCTCGACGAC CGCCCGGCGC GCTTTTCCGC GAGCTACGCC
CCGGAAAACT TCGACATGGG GTTTCGCGGC ACGGTCACGG CGCGGGTCGC GCTCCAACAA
TCCCTCAACC TGCCCGCGGT CGATCTCCTC GACGCGGTCG GCGCCGCCCG CTTCGTCGCG
CGGCTGCGGG GCGCCGGCGC GACGATCCTG CTGCCGCGCG ACACGGCGCC GGGCCTGCCC
GTAGCGCTCG GCGGGCTCGG CATCACGCTC ACTGACCTCG CCCGGCTCTA TGCGGGTCTC
GCGCGATCCG GCACCGTACC GGCGCTGGCC CGGCGCCTCG ACGGGCCGCC GGCCGCGCCC
GAGCCAGAGC GACGGGTCGC CGATCCGGTC GCGGCCTGGT ACGTCGCCGA CACTCTGCGC
GGCGCCCCGC CGCCGGAGAA CGCCCTGCCC GGCCGGATCA GCTTCAAGAC CGGCACCTCC
TACGGCTACC GCGACGCCTG GGCGGTGGGC TTCGATGCCC GCGTCACGAT TGCTGTCTGG
ATCGGCCGCC CCGACGGCGC CTCGGTGCCG GGGCTCGTCG GGCGCAGCCA CGCCGCCCCG
ATCCTGTTCG ACGCCTTCGC CCGGCTCGGC GGCGAGCCGG AGGCGCTGCC CCGGCCCCGC
GACGCCCTCG TCGCCACCAC CGCCGCCCTG CCCCCGCCGC TGCGCCACAT CCGCCGCGAC
GCACCGAAAA CCTTCGCGGC GACGCTCGGT GTGCCGCTCA AGATCGCCTA CCCGCCGGAC
GGTGCCCGGG TCGATCTCGG TTTGAGCGAA GGCGCGCAGG CCCGCCTCGC CCTCAAGGCC
CTGGGCGGCC AGCCGCCGCT GACCTGGATG GTCGACGGCC TGCCGGTGGC GGAGGCGATG
CGCCGGCAAT CGGAATGGAG CCCGGAGGGC GCAGGCTTCG CCCGGATCTC GGTGATGGAT
GCGGCAGGCG CGAGCGACAG CGTGGTGGTG CGGCTGGAAT AG
 
Protein sequence
MSTDTAFPPP SAGEGGPRSG SGEGNALSGH VAPSPACSAG TLPRRGRRVL LALFVIVALL 
LAGALWRYAT TLPPLDLTQA SLRSTVILDR KGQLLRPFAT ADGRWRLPVS ADAIDPRYLA
MLKAYEDRRF DSHPGIDPAA TLRAAWQWLA HGKIVSGGST LSMQVARLVE PRAERSLPAK
LRQMVRAVEL ERTLGKAGVL DLYLALAPYG GPVEGVRAAS LAYFGREPAR LSFAESALLV
ALPQSPEARR PDRFAANARR ARDRVLDIAA ERGVLTAAEA QAAKAEPVPV ARKQFPMLAA
HAAEQAHAAD PDARVQHLTL DARLQASLEA LATERTAAAG PALSAAILAI DNRTGAVLAH
VGSAGYLDAA RAGAVDATQA VRSPGSALKP FIYALAFEDG LAHPETLLDD RPARFSASYA
PENFDMGFRG TVTARVALQQ SLNLPAVDLL DAVGAARFVA RLRGAGATIL LPRDTAPGLP
VALGGLGITL TDLARLYAGL ARSGTVPALA RRLDGPPAAP EPERRVADPV AAWYVADTLR
GAPPPENALP GRISFKTGTS YGYRDAWAVG FDARVTIAVW IGRPDGASVP GLVGRSHAAP
ILFDAFARLG GEPEALPRPR DALVATTAAL PPPLRHIRRD APKTFAATLG VPLKIAYPPD
GARVDLGLSE GAQARLALKA LGGQPPLTWM VDGLPVAEAM RRQSEWSPEG AGFARISVMD
AAGASDSVVV RLE