Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_1649 |
Symbol | |
ID | 7118838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 1695539 |
End bp | 1696309 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 643524413 |
Product | putative transmembrane anti-sigma factor |
Protein accession | YP_002420440 |
Protein GI | 218529624 |
COG category | [K] Transcription |
COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0261743 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGTCGATC CGGTTACGGA AACCGAACTC ATCGCGTATG TCGATGGTGA ACTCGAGCCG ATGCGTCGCG TCGAAGTCGA GGCGCATCTC GCGCGCAATC CGCAGGACGC GCTGCAGGTC ATGGCCGACC TGCGCGACCG CGACGCCCTG CGCGAAGCCT TCCTGCCGGT GCCGAGCCTG CCGCCGGAGC GGCTGCGCTC CAGTGCTCGC CGGATCGACC GCGCCTTCGC GTGGCAGCGG GTTCGCTCCC GCCTGCGCCG GGCGGCGGCG GTCGTGGTCC TGGTCGGAGC GGGCTGGCTC GCCCACACCG AGAGCGGCAG CTTCGGCGTT CCCGGCTCCA TCGCCTCGCC GATCGATCCG TCCCTAGCCG AGGAAGCCAA GCAGGCCCGC GAGGCCGTGC AGATCCGCGC GCGCACGACC AGCCAGCCCA TGGCGTCGGC CTACGATCCG GCCGACCTCG AAGCTGCGAC CGGTGTCGAT CTTCCGCCTC TGCCGAAGGG GTGGATCGTC CGGGACGTGC AGATCTTCCC GAGCCGGAGC GGCACCGGGA TCGAGGTCTC GATCCAGTCG GCCGAGATCG GCGAACTTGC GCTGTTCGCC AAGCACAGCA GCGGCGCGCC CCTGTCCGAA GGGACGGAGC CGGTTGCACG CTCGAGCGAC GGGACGACGG CCTATTGGCG GACCGGCGGA ACCGCCTACG CGCTGAGCGG CTCGCGCGAC GATCCGGCCC TGCACGCCGC CGCCGCCCGC CTTGCCGCGC TTCGGAAGTA A
|
Protein sequence | MVDPVTETEL IAYVDGELEP MRRVEVEAHL ARNPQDALQV MADLRDRDAL REAFLPVPSL PPERLRSSAR RIDRAFAWQR VRSRLRRAAA VVVLVGAGWL AHTESGSFGV PGSIASPIDP SLAEEAKQAR EAVQIRARTT SQPMASAYDP ADLEAATGVD LPPLPKGWIV RDVQIFPSRS GTGIEVSIQS AEIGELALFA KHSSGAPLSE GTEPVARSSD GTTAYWRTGG TAYALSGSRD DPALHAAAAR LAALRK
|
| |