Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_1517 |
Symbol | |
ID | 7115127 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | + |
Start bp | 1571230 |
End bp | 1571970 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 643524279 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002420313 |
Protein GI | 218529497 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.664099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAAGGCCG CGGGCTACCG GGTGTTCGGC ACGAGCCGAA AAGTCGACCA AGTCGTGGAG GGCGACATCA CGATGCTGCC CTGCGACCTT ACCTCGGATG CGTCGGTCGC CGGCGTAGTC GAGACAATCT CCTCGCGGAC CGGGCGGATC GACCTGCTGG TCAACAACGC TGGCTTCGGC ATCAGCGGCG GCGCGGAGGA GTCCTCCATC GAGCAGGCGC AGGCCCTGTT CGACGTCAAC CTGTTCGGGG CCATCCGCAT GACCCGCGCC GTCTTGCCCT TGATGCGAGC CGGCGGTGGT GGCCGCATCG TCAACATCAG CTCGCTCTTT GGGCTCGTCC CCGCGCCCTA CATGGCGCTC TACGCCGCGA GCAAGCACGC GCTCGAAGGT TATTCCGAAT CCCTCGATCA CGAGGTTAGG ACACAGGGCA TCAGGGTCGT CCTCGTCGAA CCGGCCTACA CGCGCACCGC ATTCGACCGG AACCTCGTCT CTCCGGACGC GCCACTCGCC GCCTACGACG CCGCGCGCGC CGGTCAGGAG CGCCTGATGC GCGACGTCAT GGCGGCCGCC GACGCGCCAG CGGCGGTGGC CGAGACGGTC GTGAAGGCGG CGAAAGCGAC GGTGCCGAAG GTCCGCTATA CAGTCGGCAA GATGGCCCGG CGGGTTAGCC TGCTACGTCG TTTCGTGCCG GCAGGGGCCT TCGACAAAGG CATCCGCAAG CAGATGCAGC TTCCGCAATA A
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Protein sequence | MKAAGYRVFG TSRKVDQVVE GDITMLPCDL TSDASVAGVV ETISSRTGRI DLLVNNAGFG ISGGAEESSI EQAQALFDVN LFGAIRMTRA VLPLMRAGGG GRIVNISSLF GLVPAPYMAL YAASKHALEG YSESLDHEVR TQGIRVVLVE PAYTRTAFDR NLVSPDAPLA AYDAARAGQE RLMRDVMAAA DAPAAVAETV VKAAKATVPK VRYTVGKMAR RVSLLRRFVP AGAFDKGIRK QMQLPQ
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