Gene Mchl_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1313 
Symbol 
ID7115576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1343899 
End bp1344603 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content73% 
IMG OID643524090 
ProductThiJ/PfpI domain protein 
Protein accessionYP_002420125 
Protein GI218529309 
COG category[K] Transcription 
COG ID[COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0812761 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCGC CCGACACTCA CCTGGAAATC GGCTCCCTCC TGTTCGAAGG CGTCGACCAG 
ATCGATCTCA CCGGCCCGTT CGAGGTCCTG TCGCGCATCC CGAACGCGAC CTACCGCGTC
TACGGCAAGA CGGCCGAGAC GGTCCGGGAC GTTCGCGGCC TGAGGCTGAC GCCGGACGCG
GCGATCGAGG ACGCGCCGCA ACTCGACGTG CTGCACGTCC CCGGCGGTTT CGGCCAGGAG
GATCTGATGG AGGACGAGGC CGTCCTCGCC TGGCTCCGCC GCCAGGCGGG CGGCGCGCGG
AGCGTCTTCT CGGTCTGCAC TGGCGCCCTG CTCTGCGGGG CCGCGGGCCT CCTGAGAGGC
CGCCGCGCCA CGACCCACTG GGCCTCGTTC GATCTGCTGC CCTACTTCGG CGCGATCCCT
GTCGACCAGC GGGTGGTCGT CGACGGCACA TGGGTATTTG CGGCGGGCGT CACGGCCGGG
ATCGACGGCG CTCTGCGGCT GGCCGCGGAG CTACGCGGCG AGGACGCCGC GAAGGCGATC
CAGCTCTACA TGGCCTACGC GCCCGAGCCG CCCTTCGACA GCGGCACCCC GGAGAGGGCG
CCGCCGGCCA TCCTCGAACA GGCCCGCGCC GCGGTGGCGG CGATCACGGA ACGCCGCACG
GCCACCGCCC GGCGCGTCGC CGCCCGGCTC GGCGTGCAGC CTTGA
 
Protein sequence
MIPPDTHLEI GSLLFEGVDQ IDLTGPFEVL SRIPNATYRV YGKTAETVRD VRGLRLTPDA 
AIEDAPQLDV LHVPGGFGQE DLMEDEAVLA WLRRQAGGAR SVFSVCTGAL LCGAAGLLRG
RRATTHWASF DLLPYFGAIP VDQRVVVDGT WVFAAGVTAG IDGALRLAAE LRGEDAAKAI
QLYMAYAPEP PFDSGTPERA PPAILEQARA AVAAITERRT ATARRVAARL GVQP