Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mchl_1311 |
Symbol | |
ID | 7115574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium chloromethanicum CM4 |
Kingdom | Bacteria |
Replicon accession | NC_011757 |
Strand | - |
Start bp | 1340858 |
End bp | 1342474 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 643524088 |
Product | transcriptional regulator, NifA subfamily, Fis Family |
Protein accession | YP_002420123 |
Protein GI | 218529307 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
TIGRFAM ID | [TIGR01817] Nif-specific regulatory protein |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0530064 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCCGCG GAATGGATGG AAGCCTCAAG GGCGCGTCGA GCACACACTG GCGTACGCAG GAGATGTTCC TCGTCCAGGA GGTCATGAAC CTGATCGGCA AGGGCCTGCG CCTCGATCAG GTCGCGCGGG AGATGCTGCA TCTCCTCTCC GAGATCGTCG GACTGAACCG GGGACGGATC GTCCTGAAAG ACCCCGACGG CAAGGGACAC CGCATTGCCT ACGCCTATGG GCTGACCCGC GAGGAGGTCG CGCGGGGCCG CTACGCGCCG GGCGAAGGCA TCACCGGACG CGTCATCCAA GACGGTCACC TCATCATCGT GCAGGACATC GACAAGGACC CGACCTTCCT CGGGCGGGCG GTGGCGCGGG CGCAGCTTCC CCGCGGCGCC GTGTCGTTCC TGGCGCTGCC GATCCGCGTT GATCACCGGA CGGTCGGCGC CATTGCGTGC CACCGAATCC GCCACCGGGA GCGGGCGCTC TCGGACGATC TCACCATCCT GCGCATCATC GCCACGATGG TCAGCCAGTT GCTGACCCTG AACGAGCGGG TGGAGCAGAA GACGCGGGCG CTCGAGGAGC ACAACGACAT GCTGGCGCGC GAGCTGCGCA TCAAGCGCGC CCGTTACGGC ATCATCGGAA CCTCGCCCGC GCTGCTGCGC GCGCTCGCGC AGGTAGAAAA GGTCGCGGCC GCGACCGCGA GCGTGCTGCT GCTCGGCGAG TCCGGAACCG GCAAGGAACT CTTCGCCCGG GCGCTCCATC TCGCAAGTCC GCGCCGAGAC CGGCCCTTCA TCAAGGTCAA TTGCGCGGCG ATCCCCGACA GCCTGTTCGA ATCCGAGCTG TTCGGGCACG AGCGCGGCGC CTTCACCGGG GCCGTCGATG CGCGGGCCGG CTGGTTCGAG CAGGCGAGCG GCGGCACGAT CTTCCTCGAC GAGATCGGCG AGATGCCGGC GGTCCTCCAG ACCAAGCTGC TGCGCACCCT TCAGGAGGGA ACGGTCGTGC GCCTCGGCGG CAAGCGCGAG ATCCGGGTCG ATATGCGCCT CGTCGCCGCG ACGAACCGGG ATCTCGCCAC CGAGGTCGCC CACGGCCGCT TCCGAGAGGA CTTGTTCTAC CGCCTCAACG TCGTGCCGAT CACCCTGCCT CCGCTGGCGG AGCGGCGCAG CGACATCCCC GATCTGGTGC TGCATTTCCT CACCCAGGCG AACCAGAACA ATCAGCGCAA CGTCAACCTG ACCCAGGGCG CGGTCACGCA TCTCGCCCGC CAGTCCTGGC CGGGCAACAT CCGCCAGCTC GCCAACTTCA TCGAGCGGCT CGTGCTGCTG GCAAGCGAAG GTGTCTTGGA CGTCGAGGAT GTGCGGCCGA TGCTCGAAGG CGCCGTCGTC ACGGCGCCCC CGCTGCTCGC TCCCGCCTCG GCCCCGTTCT TCTCGCCCGA ACGGGAAGCG GCGTTGCGCG CGATGGGCAC CGTGCGCCCC TACCTGCCGG CCGACTCGCA CGGCCACGAA CAGTTGCGCA TGGCCCTGGC CCAGGCCGGT GGCAATAAAA CGCGGGCGGC CCAGCGGCTC GGGCTCACCG AACGCCAATT CTCCTATCGC TGGCGCAAGC TCCAGCCGGC ACCCTGA
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Protein sequence | MRRGMDGSLK GASSTHWRTQ EMFLVQEVMN LIGKGLRLDQ VAREMLHLLS EIVGLNRGRI VLKDPDGKGH RIAYAYGLTR EEVARGRYAP GEGITGRVIQ DGHLIIVQDI DKDPTFLGRA VARAQLPRGA VSFLALPIRV DHRTVGAIAC HRIRHRERAL SDDLTILRII ATMVSQLLTL NERVEQKTRA LEEHNDMLAR ELRIKRARYG IIGTSPALLR ALAQVEKVAA ATASVLLLGE SGTGKELFAR ALHLASPRRD RPFIKVNCAA IPDSLFESEL FGHERGAFTG AVDARAGWFE QASGGTIFLD EIGEMPAVLQ TKLLRTLQEG TVVRLGGKRE IRVDMRLVAA TNRDLATEVA HGRFREDLFY RLNVVPITLP PLAERRSDIP DLVLHFLTQA NQNNQRNVNL TQGAVTHLAR QSWPGNIRQL ANFIERLVLL ASEGVLDVED VRPMLEGAVV TAPPLLAPAS APFFSPEREA ALRAMGTVRP YLPADSHGHE QLRMALAQAG GNKTRAAQRL GLTERQFSYR WRKLQPAP
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