Gene Mchl_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMchl_1212 
Symbol 
ID7117906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium chloromethanicum CM4 
KingdomBacteria 
Replicon accessionNC_011757 
Strand
Start bp1228159 
End bp1228818 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content68% 
IMG OID643523992 
ProductNADH (or F420H2) dehydrogenase, subunit C 
Protein accessionYP_002420028 
Protein GI218529212 
COG category[C] Energy production and conversion 
COG ID[COG0852] NADH:ubiquinone oxidoreductase 27 kD subunit 
TIGRFAM ID[TIGR01961] NADH (or F420H2) dehydrogenase, subunit C 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCGA TTACCACCAA CGGCATCACG CTTCGCCGCA CCGTCGCGGC CGCCCAGGGC 
GAGGACGCCC TGCGGGCCAT GGGCGAGCGG ATCGCCGGAG CGCTCGGCCC GGCGGTCACC
GAATGGGCCA TCACTCGCGG CGAGCTGACG CTCGTCGTCC AGGGCAGCGA CATCGTCTAC
GCGCTGACCT ATCTGCGCGA CGAGCCGGCC TGCGCCTTCC GCTGCTTCAT CGACATCTGC
GGCGTCGACT ACCCGCAGCG GGCGCGCCGC TTCGACGTCG TCTACCACCT ACTCTCCCTG
CGTCATAACA TGCGGGTGCG GGTGAAGGTG CAGACCGACG CCGCGACCCC GGTGCCCTCT
GCGATTCCGG TCTTCCCGGC GGCCAACTGG TACGAGCGCG AGACCTACGA CCTCTACGGC
ATCCTGTTCT CGGGCCATCC CGACCTGCGC CGGCTGCTCA CCGATTACGG CTTCGAGGGC
CATCCGCTGC GCAAGGACTT CCCGCTGACC GGCTTCGTCG AGGTCCGCTA CGATCAGGAC
GAGGCGCGCG TCGTCTACGA GCCGGTCAAG CTGACCCAGG AGTTCCGCAA CTTCGACTTC
CTGTCGCCGT GGGAGGGCAC GGATTACGTG CTCCCCGGCG ACGAGAAGAC GTCGAGCTGA
 
Protein sequence
MEAITTNGIT LRRTVAAAQG EDALRAMGER IAGALGPAVT EWAITRGELT LVVQGSDIVY 
ALTYLRDEPA CAFRCFIDIC GVDYPQRARR FDVVYHLLSL RHNMRVRVKV QTDAATPVPS
AIPVFPAANW YERETYDLYG ILFSGHPDLR RLLTDYGFEG HPLRKDFPLT GFVEVRYDQD
EARVVYEPVK LTQEFRNFDF LSPWEGTDYV LPGDEKTSS